Geobacter metallireducens: Gmet_3035
Help
Entry
Gmet_3035 CDS
T00295
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gme
Geobacter metallireducens
Pathway
gme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gmet_3035 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gme03019
]
Gmet_3035 (rhlB)
Enzymes [BR:
gme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gmet_3035 (rhlB)
Messenger RNA biogenesis [BR:
gme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gmet_3035 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABB33250
UniProt:
Q39R74
LinkDB
All DBs
Position
3420212..3421528
Genome browser
AA seq
438 aa
AA seq
DB search
MKFTDLNLPELVQRGIADTGFTDCTPIQEKTLPLALSGKDVAGQAQTGTGKTAAFLISLF
TRLLKNPTEGETRNPRALILAPTRELVVQIEKDAQALGAHCGFVIQAIYGGVDYMKQRSA
LKEGADVVVGTPGRLIDYLKQKVYSLKEIEVLVIDEADRMFDMGFIADLRFILRRLPPFD
KRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFPLLLGL
LRKKGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRMRILEDFKNGKLPIM
IATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEA
IHEYIKDKIPVEWAEDDLFVHDFKRVKPKPKGHETRAKGPTRHGRKHPEGEKKEGEGEAK
KRRRGPRKKPAGEKPKPE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccgacttaaacctccccgaactggtgcaacggggtatcgccgacaccggc
ttcaccgactgcaccccgatccaggaaaagacccttcccctggccctttccggtaaggat
gtggccggccaggcccagaccggcaccggcaagactgcagcctttctcatcagcctcttc
acccggctcctgaagaaccccacggagggagaaacccgcaatccgcgcgccctgatcctg
gctcccacccgggagctcgtcgtccagatcgagaaggacgcccaggccctcggggcccac
tgcggcttcgtgatccaggccatctacggcggcgtcgactacatgaagcagcggagcgcc
ctcaaggaaggggccgacgtggtggtcggcaccccggggcgcctcatcgactacctgaag
cagaaggtctactccctcaaggagatcgaggtgctggtcatcgacgaggcggaccggatg
ttcgatatggggttcatcgccgacctccgcttcatcctccggcggctcccccccttcgac
aaacgccagaacctcatgttctccgccaccctcaaccagcgggtgatggaactggcctac
gagttcatgaacgtccccgaaaaggtggcggtcacccccgagcagatgaccgccgagcgg
gtggagcaggtcctctaccacgtggggcgcaaggagaaattcccgctcctcctgggcctc
ctgcgcaagaaggggatggagcggaccatgatcttcgtcaacaccaagcgggaggcggag
ttcctggacgagcggcttaatgccaacgacttcccctgtcgggtcatctccggcgacgtg
gagcagcgcaagcggatgaggattctggaggacttcaagaacggcaagctcccgatcatg
atcgccaccgacgtcgcctcccgcggcctccacatcgacggggtctcccacgtcatcaac
tacgaccttccccaggacgccgaggactacgtccaccgcatcggccgcaccgcccgggcc
ggcgccgagggaaaggcgatctccatggccgatgaggacggcgccttccacctggaggcg
atccacgagtacatcaaggacaaaatcccggttgaatgggccgaggacgacctcttcgtc
cacgacttcaagcgggtgaaaccgaagcccaaggggcacgagacccgagccaaggggccg
acccgccacggccggaagcacccggaaggggagaagaaagagggagaaggggaggcgaag
aagcgccgccgcgggccccggaagaaaccggcgggggagaagccgaagccggaatag
DBGET
integrated database retrieval system
