Geobacter metallireducens: Gmet_3050
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Entry
Gmet_3050 CDS
T00295
Name
(GenBank) nucleic acid-binding protein, putative
Organism
gme
Geobacter metallireducens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_30
AAA_19
Helicase_RecD
Viral_helicase1
nSTAND3
UvrD-helicase
MeaB
DUF559
FtsK_SpoIIIE
ResIII
AAA_7
AAA_16
DEAD
TrwB_AAD_bind
NPHP3_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABB33265
UniProt:
Q39R59
LinkDB
All DBs
Position
3439706..3445078
Genome browser
AA seq
1790 aa
AA seq
DB search
MEPRPHFNTSTAELDAIYRKNIDNISILNEILKELHHREKPKAVQLRNEITATLAKKKQG
STSVADTKQQAAAPKPLSTPSQSSLALTPPIARVAPVQTQSRSVSPPTIPAPPHPPPVQS
EQHAQPEPHIKATTEPTSPPQSQSQPVRPSVLKPQLNKQQVHVLNVIEYLSSLARVNSIV
VRDITNYQNTLWLSDIPRDGTNCYSRTWGADESIPDDVWLEVKKMPEPPMPAIPKVCEHW
VDESLLRKIDFVPTLRQSIVLSKKFIDPVTGEEHEEIETKQLSDNPAVVIAWDGYIQQKW
QPWTTIYKKHLEIQKVFGALFSIYQEQQRLGEQYELVVGLGLLTWQQPGGQSVRRHLLVA
KASLEFESAIGRFAVKPAPDGDQSEVELDMLDPESYPANSSSLIASGRQLRDNFWDRTIS
NAILASISNSLEKQGRGNYQAEIDRASGASATDIPLIEFAPALILRKRSQKGLLNILADM
RRQVEMGLEIPEQFLDLCEVSGQHEMANGGDALEATPPDHIYFPLPANEQQRQIIYKYNK
QNGVLVQGPPGTGKSQTISNLICHLLATGQRVLVTAKTARALEVLHQKIPPVVSPLCISM
LGSGTEERESLERSVNGILNNVNTRNDLVAARKMEELEQKLHDNKKAVAEAQYALIALRE
KETFQHTLAGGAYTGTAATIAVKLLEDTPLYNWLDDEISDSDEIPLTRSDLDILSAMLLE
ISDEMEAEYSKHVPDIAKDIPDCEYLRNAWQELTNHELTAKASEARLSSISGQAIARAAY
DQITTLNETMTRLVAEIHSVMRRPLPWVNGAIREVLADLDTPWKQLHKLTTERLGELKTL
AQKTQSLTVEIPASMDLMKLHGDAKTLLDHFSAGGGLKQFGFFGHPIVKKHGESVKQVRV
NGQECVDRNVLPKLVSYLEVKFLLKEIWSFWVGKVTCQPEKHPLMQIAEIDELIEALEHI
LSLYTLRAEVLAVVERIHGLPRPQFENVESLDELMNTCQDVLKQSVLKDLYQKMLQEEGR
ISAVVAHTNAHPLCGELFQSFKVRNADSYCAAVSKIKAVGAQRSRVIAKQAYLDAIASKA
PRFAATLKNVHDKQVAVQRLKGLDNAWAWKQASDWMYKFHNQDGNVLERNIHRLEVSSAK
ALEELAALKAWSHCFSRMTRDHQQHLVSWHQSMRRLGKGTGKHAHKHRQDAQKSLNECKG
AVPSWIMPLHRVYETVEASPGCFDVIIVDEASQCGFEALPLLYLAKKIIVVGDEKQISPE
AVGIDRSHVFNLMRTHLADFKHSASFDIENSLFAHGQIRFGNRITLCEHFRCAPEIIRFS
NELCYTSDPLIPLKQVPPNRLEPLKAVHVPSGYREGSGQTIVNKPEAEAIVEQIIKCCKD
SKYDGMTMGVIVLQGDAQAKIIEDMLVKRLGTEEMQERRLLCGNPYSFQGDERDVVFMSM
VAAKNERIGAFTQDKDMRRFNVAASRAREQMWLFHSVTSNDLSSSCFRRRLLNHFYDTSV
RKVAGISVEDLQRAAHIADRWREQPPDPFDSWFEVDVALHIAGRGYTVIPQFEFAGKRID
LVIQGGSAQLAVECDGDHWHGRDKYEDDMQRQRMLERCNWVFFRIKESYYRSNKEKTLEE
LWGMLEARGIFPKGSEQCSSDESAKMDSEPANDQEEFDQNDTGVNDDTNDTSDTDDVDSE
MDSEDDIGESEVPLEGCPLSAQEALNAKPAELRRLIIEAMKTLPNNSCVRKALPTIILRK
CHIKTRGTPRKLFTRKVESQVAVMIRDGKLVAYKSKNDRLKLGWQFATES
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaggccacatttcaacacatcgactgcagaacttgatgcaatttacagaaaa
aatattgataacatctcaatactcaacgaaattctaaaagaacttcaccatcgcgaaaaa
ccaaaagccgtccaattacggaatgaaattaccgctactttagctaagaagaaacagggg
agtacttctgtagctgataccaagcaacaagctgcagcccccaagccactttcaacgcca
agccagtcttcacttgcattgacgccaccaattgctcgtgtagcacctgtacagacgcaa
tctcggtcagtttctccgcccacaataccagcaccgccccatcctccacccgtccaatcc
gaacagcatgcacagccggaaccacatataaaagccacaactgaaccaacttcaccacca
caatcccaatctcaaccagtgagaccgtcagtgctcaagccacagcttaataagcagcaa
gtacacgttctcaatgtgatcgagtatctgtcatcccttgccagagttaattctatagta
gtcagggatatcactaactaccagaacactctctggctttcagatatcccccgcgacggg
acaaactgctattcaaggacgtggggggctgacgaaagcattcctgacgatgtatggctg
gaagtgaaaaaaatgccggaacccccaatgcctgcaatccccaaggtttgtgagcattgg
gttgatgaatctctcctgcgtaagatcgactttgtacccactcttcggcaatcgattgtg
ctgagcaaaaagtttatcgaccccgttacaggcgaagagcatgaagaaatagagacaaaa
cagctatctgacaatccagcggtagtcattgcatgggatggctatattcagcaaaaatgg
caaccttggacaacaatctacaaaaagcaccttgaaatccagaaggtctttggcgctctg
ttcagtatttaccaggaacagcaacgtcttggcgagcaatatgaactggtcgttggcctg
gggttgttgacatggcaacaaccgggtggacaatcagtgcgtcggcatttattggtagcc
aaggcctctctcgaattcgaatccgcaataggacggtttgccgtaaaacctgctccagat
ggcgatcaatctgaagtcgaactcgatatgcttgacccggaatcctatccagcaaattca
tcgtcactgatagcatctggcaggcaattgcgggacaatttctgggacagaacgatttcc
aatgcaatactggcttccatatcgaactctctggaaaagcaaggcagaggcaattatcag
gcggaaatcgaccgtgcaagcggtgccagtgctaccgatatccctcttatcgaattcgct
ccagccttgatactgagaaaacggtctcaaaaagggttgctaaatatccttgccgatatg
cgtcgacaggtagaaatggggttggaaataccggagcagttccttgacctgtgtgaagtc
tcaggtcagcatgaaatggccaatggaggggatgcgctggaagctaccccccctgatcat
atctacttccctcttcctgcaaacgaacagcaacgacagataatctacaagtacaacaaa
cagaatggggtactggtgcaaggcccgcccggtaccggtaaatctcagacaatctcgaac
ctgatctgtcatctgttggcaaccgggcaacgggtccttgtaactgcaaagacggcaagg
gcgcttgaggttcttcaccaaaagattcctcccgtcgtaagtccactgtgcatcagcatg
cttggcagcggcacggaagaacgtgaatcgcttgagcgaagcgttaatggcattctgaac
aacgtcaatacccgtaacgatcttgttgccgccaggaaaatggaagagcttgaacaaaaa
ctccatgacaacaagaaagccgttgccgaagcccaatatgcattgatcgccttgcgggaa
aaagaaacattccaacatactctggctggaggagcatataccggtaccgctgcaaccatt
gctgtcaagcttttggaggatacccccctatataactggcttgatgatgaaatcagcgat
agtgacgaaatccccctcactcgttcggatttagacattttgtctgcaatgctgcttgag
atcagtgatgagatggaagctgagtacagcaagcatgttcctgacattgccaaagatatc
cccgattgtgaatacctacgcaacgcatggcaggagctaacaaaccatgagcttacggca
aaagccagcgaagccaggttaagttccatttcaggacaagctatagcacgggcggcatat
gaccagatcaccactctgaacgaaaccatgacccgtcttgtagctgaaatacatagcgtc
atgcgtcgtcctctgccatgggtaaatggggcaatcagggaagtactggcagaccttgac
accccatggaaacagctgcacaagctcacaactgaacggcttggtgagctgaaaacactt
gcgcaaaaaactcagtctcttacggtggaaattccggcatccatggatttgatgaaattg
catggcgatgccaagaccctactggaccatttttccgctgggggtggtctcaagcagttc
ggcttttttggacatccaatagtaaaaaaacatggtgaatccgtaaaacaggtacgggtg
aacggtcaggaatgcgtagacaggaatgtgctgccaaagctggtcagctatctcgaggtg
aagtttctgttgaaagaaatctggtctttctgggttggtaaagttacctgccagccagaa
aaacacccactaatgcagattgcagagattgatgagctgattgaagcactagagcacatt
ttaagtctgtatacgctccgcgcagaagttcttgcggtagtcgaaaggattcatggtctg
ccccgtccacaattcgagaatgtcgaatcgcttgatgagcttatgaacacctgtcaggac
gttctcaagcagtctgttctcaaagatctttatcaaaaaatgctgcaggaagaaggtcgc
atatcggctgtagtcgcccatactaatgcccatccgctttgtggcgagcttttccagtca
ttcaaggtgagaaacgcagacagttattgtgccgccgtcagtaaaatcaaggccgttggg
gcacagcgctcacgggtcatagcaaaacaggcctaccttgatgccattgcctcaaaagcc
cctcggtttgcagcaaccctgaaaaacgtacatgataaacaggttgccgtgcaacgcctc
aagggattggataatgcatgggcatggaaacaggcatctgactggatgtacaagttccat
aatcaggatgggaatgtgcttgaaaggaacattcaccgccttgaagtctcatcagcaaag
gcattggaagaacttgccgcgcttaaggcatggtcacactgtttttccagaatgaccaga
gatcatcagcaacatctggtttcctggcatcaatccatgcgtcgattgggcaaaggaacg
gggaagcatgctcacaagcatcgtcaggatgctcagaaaagcctgaacgaatgcaaggga
gctgttccttcgtggatcatgccgctccacagggtttatgaaacggttgaggcatccccc
ggttgctttgatgtgattatcgttgacgaagcatcgcagtgcggttttgaagcgttgcct
cttttgtaccttgccaagaaaatcattgttgttggtgatgaaaagcagataagccctgaa
gctgtcggtattgacaggtcgcatgtgttcaacctgatgcggacgcaccttgccgacttt
aaacatagtgcttccttcgatattgagaacagcctgtttgcccatgggcagattcgtttc
ggtaacagaattaccttgtgcgagcatttcaggtgtgctcccgaaattatccgtttcagt
aatgagctgtgttacacctctgatccgctcatccccttgaaacaagtcccaccgaatcgg
cttgaaccgttgaaggcggttcatgtcccatcagggtacagggaaggcagtggacagacc
attgtcaataagcctgaagctgaagcgatagttgagcaaatcatcaaatgctgtaaagac
agcaagtacgacggtatgacgatgggggttatcgttcttcaaggtgatgcccaggcaaaa
atcattgaagacatgctagtaaagcggttgggtaccgaagagatgcaggaacggcggcta
ttgtgcggcaacccgtacagcttccagggcgatgagcgcgatgttgtctttatgagtatg
gttgcagcaaagaatgaacggattggcgctttcactcaagataaagacatgcggcgcttc
aacgttgctgcaagtcgtgcaagggaacagatgtggctgttccactccgttaccagtaac
gatctcagcagcagttgcttcagaagacggctgttgaaccacttctatgatacgtctgtt
cgcaaggtagccggaatatccgtggaggacttgcaacgggctgcccatattgctgaccgc
tggcgtgagcagccgcctgatccgttcgacagctggtttgaagtagatgtcgcgttgcac
atcgctgggcgcggctatacggttattccgcaattcgagtttgcaggcaagagaatagac
cttgttatccaggggggcagtgcacagcttgccgtcgaatgcgatggcgatcattggcat
ggacgggacaaatatgaagacgatatgcaacggcagcgcatgctggagcgctgcaattgg
gtctttttcagaataaaagaaagctattaccgcagtaacaaggaaaagacactggaagaa
ctttggggaatgcttgaagcaaggggcattttcccaaaaggaagcgagcaatgttcatcg
gacgaatcagccaaaatggattccgaaccggcaaacgaccaagaggagttcgaccagaat
gatacaggtgtaaatgatgatacgaatgatacatcagatacagatgatgttgattccgaa
atggatagtgaagatgacattggcgaatcggaagtgcctctagaaggttgtccactctca
gctcaagaggcgttgaatgcgaagcctgctgaattgcggcgattgataattgaagcaatg
aaaacactgccgaataattcctgtgtgcgtaaagcattaccaacaatcatccttagaaaa
tgtcacatcaaaacaagagggacgccccgtaagttgtttactcgaaaagtggaaagccaa
gtggcggttatgatcagggatgggaagttggttgcgtataaaagcaaaaatgaccggtta
aagcttgggtggcaatttgctactgagtcttaa
DBGET
integrated database retrieval system
