Geobacter metallireducens: Gmet_3055
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Entry
Gmet_3055 CDS
T00295
Name
(GenBank) 3'-to-5' exonuclease, putative
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gme
Geobacter metallireducens
Pathway
gme03030
DNA replication
gme03430
Mismatch repair
gme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gmet_3055
03430 Mismatch repair
Gmet_3055
03440 Homologous recombination
Gmet_3055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gme03032
]
Gmet_3055
03400 DNA repair and recombination proteins [BR:
gme03400
]
Gmet_3055
Enzymes [BR:
gme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gmet_3055
DNA replication proteins [BR:
gme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gmet_3055
DNA repair and recombination proteins [BR:
gme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gmet_3055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
TELO2_ARM
Motif
Other DBs
NCBI-ProteinID:
ABB33270
UniProt:
Q39R54
LinkDB
All DBs
Position
complement(3450169..3450825)
Genome browser
AA seq
218 aa
AA seq
DB search
MGKFTAVILDFETTGLSPGYGDRAIEIGAVLVRNNRIVDRFQSLMNPGKRVSGFIEEYTG
ITNEMLAKAPPAEQVMERFASFIAGHNLVAHNASFDRRFLDAELSRIGRRRTGDFACSML
AARRIYTNAPNHRLETLVSHLSLQTDGVFHRALADAEMTAQLWTAMIGELKETYRLRQVT
FELMHSLGGVAKKAVPAYLERVAAGRTCACARGGRSLG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtttaccgccgtcatcctcgacttcgagacaactggcctctcacctggctat
ggcgaccgggccatcgagatcggtgcggtactggtccggaacaaccggattgttgacaga
ttccagagtctcatgaatcccggcaagagggtgagcggtttcatcgaggaatacaccggc
atcaccaatgagatgctggccaaggccccacctgcggagcaggtgatggagcggtttgcc
tccttcattgccggccacaacctggttgcccacaacgcgagcttcgaccgccgcttcctg
gacgccgaactctcccgcatcggcaggagacggaccggggactttgcctgctcaatgctc
gctgcccgccggatctacaccaatgccccaaaccaccgcctggagacgctggtcagccac
ctcagcctccagacagacggagtcttccaccgggctctcgccgatgcggaaatgaccgcc
cagctctggacggcgatgatcggggaactcaaggaaacctatcgcctcaggcaggtcacc
tttgagctcatgcactccctcggcggcgtggcgaagaaggcagtgccggcctatcttgaa
cgggtggcggcagggcgaacttgtgcctgtgcgaggggcgggcgatctttaggctga
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