Geobacter metallireducens: Gmet_3182
Help
Entry
Gmet_3182 CDS
T00295
Symbol
pcnB
Name
(GenBank) nucleic acid-independent polyadenylating polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gme
Geobacter metallireducens
Pathway
gme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gmet_3182 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gme03019
]
Gmet_3182 (pcnB)
Enzymes [BR:
gme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Gmet_3182 (pcnB)
Messenger RNA biogenesis [BR:
gme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Gmet_3182 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF5926
Motif
Other DBs
NCBI-ProteinID:
ABB33395
UniProt:
Q39QS9
LinkDB
All DBs
Position
complement(3582804..3584177)
Genome browser
AA seq
457 aa
AA seq
DB search
MKTPMNSEPVIIPRPDHPISRSQVSPNALRVLYRLKDNGCIAYLVGGCVRDLLLGREPKD
FDVATNATPNQVKRLFRNCRLVGRRFRLAHIHYQDEIIEVATFRALAPEEPEDTAPAPVS
PENVPGEGERPRLPRHVVSDEGMVLRDNVFGTPEEDAVRRDFTVNALAYNIADFSIIDYA
NGMEDLRRGVIRTIGDPLVRFTEDPVRMLRAVRFAATLGFTVEDATWQAIRELAPAITRA
TAPRLYEEVLKLFLSGEGERVYQLLRQAGLFSHLFPRFSAWLDREIDGFPHSQVGKALEW
ADDQVGGGEPVSPPLLLALMFGEYVEERAAELADAGMPVPDAVNAAMAGFLGEQAPIIAI
PQRIALAVREILLIQHRLRKIPGKRPQGVLARSCFAEALAYLRCRCAVTGEGGKILAWWE
RYARESVMPPVEPATGGGEAPPKRRRRRGKRRKPPAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccctatgaacagcgaaccagtcatcatcccccgccccgatcatcccatctcc
cgctcccaagtgagccccaacgcactccgggttctctaccgtctcaaggataacggctgc
attgcctacctcgtgggaggatgcgtccgcgacctcctgctgggacgcgaacccaaggat
ttcgatgtggccaccaacgccaccccaaaccaggtgaagcggctgttccgcaactgccgt
ctggtggggcgcaggttccggctcgcccacatccattaccaggacgagattatcgaggtt
gccactttccgggccctggcgccggaggagcccgaagataccgcgcctgctccggtctcc
ccggagaacgtgcccggcgagggggagcgcccccggctgccccgccatgtggtgagcgac
gagggaatggtgctgcgggacaacgtcttcgggacccctgaagaggacgccgtgcggcgg
gacttcaccgtgaacgccctggcttacaacatcgcggatttttccatcatcgactatgcg
aatggcatggaagacctgcggcggggggtgatccggaccatcggcgatccccttgtccgc
ttcacggaagaccccgtccggatgctgagggcggtgcgctttgccgccaccctgggtttc
accgtggaggatgccacctggcaggcaatccgggagctggcccccgccatcacccgggcc
acggccccccgactctacgaggaggtgctgaagctcttcctctcgggtgaaggggagcgg
gtctaccagctgctccgccaggcagggcttttcagtcatctctttccccgtttcagcgcc
tggctcgaccgggagatcgacggttttccccattcccaggtcggcaaggccctggagtgg
gcggacgatcaggtggggggcggagagccggtctcgccccccctccttctcgccctcatg
ttcggcgagtacgtggaggaacgggccgcggagttggctgatgcggggatgccggtgccg
gacgcggtcaacgcggcaatggccggctttcttggcgagcaggcgccgatcattgccatt
ccccagcggatcgcgctcgctgtgcgggagattctgctgattcagcaccgtctccggaag
ataccggggaagcggcctcagggggtacttgcccgatcctgctttgccgaggccctggcc
tacctccgttgccggtgcgcggtgacgggggagggtgggaaaattctcgcctggtgggag
cgctacgcccgggaaagcgtcatgccgccggtggagccggcgaccggcggaggagaagct
cccccgaaacgccggcggcgccgggggaaaaggcggaagcctcctgccgcgtga
DBGET
integrated database retrieval system
