Geobacter metallireducens: Gmet_3389
Help
Entry
Gmet_3389 CDS
T00295
Name
(GenBank) ribonuclease D, putative
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gme
Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gme03016
]
Gmet_3389
Enzymes [BR:
gme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Gmet_3389
Transfer RNA biogenesis [BR:
gme03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Gmet_3389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABB33601
UniProt:
Q39Q73
LinkDB
All DBs
Position
complement(3802794..3803942)
Genome browser
AA seq
382 aa
AA seq
DB search
MPVQPVSPEIITTPDGVRRLADRLSREPYVACDLEADSMHHYQEKVCLIQFTVPGLAAIV
DPLAVADLAPLAPVFANPSIRKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQFLGEREF
GLAAVLRKRFGVELDKQYQRADWSRRPLTAGMIEYAAKDTTLLIELCGRLEAELREKGRI
GWVEEECALLARVRVAQRSDGEPMFLRFKGASRMASRSLAVLEEILCFRDRRAQQMDVPP
FKVLGTETVRELAEKKPRSLAELTGITGITERVVERCGEGIVRAVEKGLAVPEQELPFFP
REERRKVGGDEERRIKALKGWREDKARRFAVEPGFLANNALLEQIALVFPRSEVELEGIA
GLRPWQRREFGAEMVAALQARR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgttcaacccgtttcacccgagatcataaccacccccgacggggtccgccgcctt
gccgaccgcctctcccgggagccctatgtggcctgcgacctggaggccgactccatgcac
cactaccaggagaaggtctgcctgatccagttcacggtgccggggcttgccgccatcgtc
gaccccctggcggttgccgacctggcccccttggcgccggtctttgccaacccctccatc
cgcaaggtattccatggggccgattacgacatccggtccctgcaccgggacttcggcatc
gaggtgaataacctcttcgacaccatgatcgcgtgccagtttctgggggagcgggagttc
ggcctggcggcggtgctccggaagcgtttcggagtggagctggacaagcagtaccagcgg
gccgactggagccggcgccccttgacggcggggatgatcgagtatgcggcgaaggatacg
acgctcctcatcgaactctgcgggcggctggaggcggaactccgggagaaggggcgtatc
ggctgggtggaggaggagtgtgccctcctggcgcgggtgcgggtagcccagcgctccgac
ggcgagccgatgttcctccgcttcaagggagcctcgcggatggcttcccggtccctggcg
gtgctggaagaaatcctctgcttccgggatcggcgggcgcaacagatggacgtccctccc
ttcaaagtgctgggcacggaaacggtccgggaactggccgagaagaagccccgatccctt
gccgagttgaccggcattacgggcatcacggaacgggtcgtggagcggtgcggcgagggg
atagtgcgggccgtggagaaggggctggcggtgccggagcaggagcttcccttctttccc
cgggaggagcggcggaaggtggggggggacgaggagcggcgcatcaaggccctcaaaggg
tggcgtgaggataaggcccggcggttcgccgtggagcccggcttcctggccaataacgcc
cttttggagcagattgccctggtctttccccggtcggaggtggaactggaggggatcgcc
ggtcttcgtccgtggcagcggcgggagttcggggccgagatggtggcggccctccaggcc
aggcgctag
DBGET
integrated database retrieval system
