Geobacter metallireducens: Gmet_3428
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Entry
Gmet_3428 CDS
T00295
Symbol
hdrD
Name
(GenBank) heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit D
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
gme
Geobacter metallireducens
Pathway
gme00680
Methane metabolism
gme01100
Metabolic pathways
gme01120
Microbial metabolism in diverse environments
gme01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Gmet_3428 (hdrD)
Enzymes [BR:
gme01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Gmet_3428 (hdrD)
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
Gmet_3428 (hdrD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FrhB_FdhB_C
Fer4_2
Fer4_10
Fer4_8
Fer4_17
Fer4
Fer4_9
Fer4_7
Fer4_6
Fer4_3
FrhB_FdhB_N
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ABB33640
UniProt:
Q39Q34
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All DBs
Position
3847758..3848675
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AA seq
305 aa
AA seq
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MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTT
PADTDKLIFSPACVNNLALYLSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADI
HVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLPELPHFTPAESEELARLEAMT
PAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDD
QSFIK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaacactacggctcaacaactcgataccaccgccatcgcccctgcggtctacgcgacc
attaccgacgccatctgccgggaagctgagaaagccctggagagcggcgccgtggccgcc
gtggtggggtggcaggcggggcgaaggcaaggcaccgccatgccggccatcgtcaccacc
ccggcagatacggacaagctcatcttttccccggcctgcgtcaacaacctggccctctac
ctctccaaagccaagaaggagatccgggccagggggaagatcgccatcgtggtcaaggga
tgcgacctcaaggcgcttgtgggactcatgggagagaaccagctgaaacgggcggatatc
cacgtgatcggcgtggtctgccccggggtgcgagggacaagcgaacccctcgcgaagaag
tgccgggagtgcacggtgcacaccccggaaggggccgatgtcaccgtggggacgctcccc
gagttgccgcacttcacgccggccgagagcgaggaactggcccggcttgaggccatgacc
ccggcggagcgctggagcttctggaaggaacacttcgcccgttgcatccgctgctacgcc
tgccgccaggtctgccccttctgctactgcgagcagtgcctctgcgaccgcaaccgcccc
caggcggtggagaccacgccgcggccggccggcaacatggcctggcacatcgtacgggcc
atgcacctggcggggcgctgcgccgggtgtgccgagtgcgagcgggcctgccccatggac
atccccttgaatctcctgaaccgcaagatggccaaggagttgaaggagctctacggccac
gaggcggggttcgaggtgaaggagaagggtcccctggcggagtaccgggaaaacgacgac
cagagttttataaaataa
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