Geobacter metallireducens: Gmet_3435
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Entry
Gmet_3435 CDS
T00295
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridines 1911, 1915, 1917 synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gme
Geobacter metallireducens
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gme03009
]
Gmet_3435 (rluD)
Enzymes [BR:
gme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Gmet_3435 (rluD)
Ribosome biogenesis [BR:
gme03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Gmet_3435 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABB33647
UniProt:
Q39Q27
LinkDB
All DBs
Position
complement(3856614..3857573)
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AA seq
319 aa
AA seq
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MDTTYEFIAPGEGEAGRLDQFVARSVEGMTRSTVQRLIDEGRVTVDGKVEKPSLKLRGGE
RIVVAVPPPAPAVPEAEEIPLVILHEDSDLVVVNKSAGMVVHPGAGTPGGTLVNALLAHC
TDLSGIGGEIRPGIVHRIDKDTTGVLVVAKNDRSHEGLARQFREHTIKRIYLALVFGSPK
TDTGRIEGAIGRHPTDRLRMSGKAKHGKHAVTHWKVLARYPGMTLLRLRLETGRTHQIRV
HLAESGHPLVGDEVYGGAGRANDLRDPVLKKLVRELGRQALHAKTLGFIHPASGSYVEFD
TELPDDMARIITYLEQQGA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacacaacctatgaattcatagcccccggcgagggggaggccggccgtcttgaccag
ttcgtggcccgctccgtggaggggatgacccgctccacggtgcagcgcctcatcgatgag
gggcgggtgacagtggacgggaaggtggagaagccgtccctgaagctgcggggaggggag
cggatcgtggtggcggtgccgccgccggctccggcggttcccgaggcggaggagattccg
ctcgtgatcctccacgaggacagcgacctggtggtggtcaacaagtcggcggggatggtg
gtccaccccggagccgggacgccgggcggaaccctcgtgaatgcgctcctggcccactgc
accgacctgtcggggattggcggcgagatccgccccggcatcgtccaccgcatcgacaag
gacaccaccggcgtcctggtggtggccaagaacgaccgttcccacgaggggctcgcccgc
cagttccgggagcacaccatcaagcggatctacctggccctggtcttcggctcgccgaaa
accgacacggggcgcatcgagggggccatcggccgccaccccacggaccgcctccggatg
tcgggaaaggcgaaacacggcaaacatgccgtcacccactggaaggtcctggcccgctac
ccggggatgaccctcctgcggctgcggcttgagacggggcggacccaccagatccgggtc
cacctggcggaatccgggcatcccctggtgggggacgaggtctacgggggggccggccga
gccaacgacctgcgggacccggtcctgaagaagctcgtccgggagctggggcgccaggcc
ctccacgccaagaccctcggcttcatccacccggccagcggctcctacgtcgaattcgac
acggagctgccggacgatatggcccgaatcattacctatcttgaacagcaaggagcatag
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integrated database retrieval system
