Globicephala melas (long-finned pilot whale): 115838709
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Entry
115838709 CDS
T11080
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115838709 (RNF20)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115838709 (RNF20)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
115838709 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
BRE1
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
115838709
NCBI-ProteinID:
XP_030685734
LinkDB
All DBs
Position
6:complement(30898066..30923530)
Genome browser
AA seq
975 aa
AA seq
DB search
MSGIGNKRVAGEPGTSVPPEKKTAVEDSGTTVETIKLGSVSSTEELDIRTLQAKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL
LTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLATLASSSSEEMESQLQERVES
SRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAVQELNSFLAQEDMRLQELTDLLQ
EKHCTMSQEFAKLQSKVETAESRVSVLESMIDDLQWDIDKIRKREQRLNRHLVEVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAQNRHCELEKLRQDFEEVTTQN
EKLKVELRSAVEEVVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRGTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKQDP
EDLSAQSTASKASQEEVNEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKES
EKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDK
VQLMAAEKKSKGELEDLRQRLKDLEDKEKKENKKMADEDALRKIRAVEEQIEYLQKKLAM
AKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEE
KEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRKAMEA
AQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLETTKKPD
NVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKC
NAAFGANDFHRIYIG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaattggaaataaaagagtagctggagagcctggcacatctgtgcctccggag
aagaagacagctgttgaagactcagggaccacggtggaaacaattaagctcgggagtgtc
tcttcaacggaggagttagacattcgaacactgcaagccaaaaatcgcaaactggcagaa
atgctggatcaacggcaagccattgaagatgaactccgtgagcacattgaaaaactggaa
cgaagacaggccaccgatgatgcctcactattgatcgtcaaccggtactggagtcagttt
gatgaaaacatccgtatcatccttaaacgttatgatctggagcagggtttgggagaccta
ctcacagaaagaaaagcccttgttgtgcctgagccggaaccagactctgatagcaatcag
gaacggaaagatgaccgagagagaggggaagggcaagagccagctttctctttccttgct
actttggccagcagttccagtgaagagatggaatctcagctgcaggagcgcgtggagtcc
tcccgccgagctgtgtcgcagattgtgaccgtctatgataaactgcaagaaaaagtggag
ctcttatcacggaagctgaacagtggagataatctgatagtggaggaagcagtgcaggag
ctgaattccttccttgcacaagaggacatgaggctacaagaattgacagacctccttcag
gagaagcattgcaccatgtctcaggagttcgccaagttgcagagtaaagtggagacagct
gagtcacgagtatctgtcctggagtccatgattgatgacctgcagtgggatattgacaaa
attcgaaagagggaacagcgactcaatcgacacttagtagaagtcctagaacgggtgaat
tcaaaaggttataaagtatacggtgcagggagcagtctctatggcggcacaatcactatc
aatgcccggaagtttgaggaaatgaacgcagaacttgaggagaacaaagagttggctcag
aaccgtcactgtgagctggagaaacttcggcaagactttgaggaggtcactacgcaaaat
gaaaagctgaaggtggaattgcggagtgctgtggaggaagtggtcaaggagactccagaa
tatcgctgcatgcagtcacagttctctgtcctgtacaacgagagcctgcagttgaaagcc
cacttggatgaggctcggaccctacttcatggcaccaggggtacccaccaacgccaagtt
gagctcattgagcgagatgaggtgagtcttcacaagaagctgaggaccgaagtgatccag
ctagaagatactctggcccaggtccgcaaggagtatgaaatgctgaggatagaatttgag
cagacccttgctgccaatgaacaagcaggccccataaaccgggagatgcgccacctcatc
agtagccttcagaatcacaatcaccagctgaagggggaggtcctgaggtataagcggaaa
ctgagagaagcccagtctgacctgaacaagacacggctgcgcagtgggagtgccctccta
cagtctcagtccagtactgaggaccctaaggacgagcctgcagagctaaaacaagatcct
gaggacttgtctgcccagtccaccgcatcgaaggcatctcaggaggaagtcaacgaaatt
aagtccaaacgcgatgaggaggagcgagaacgagaaaggagggagaaagagagggagcga
gaaagagagcgggagaaagaaaaggagagagaacgagagaaacagaaactaaaagagtca
gaaaaagagagagattctgctaaggataaagagaaagggaaacatgatgatggaaggaag
aaggaagcagaaattatcaaacaattgaagatcgaactcaagaaggcacaggagagccaa
aaggagatgaaactattgctagatatgtaccgctctgccccaaaggaacagagagacaag
gttcagctaatggcagctgaaaagaagtctaagggagagttggaagatttaaggcaaaga
ctcaaagatctggaggataaggagaaaaaagagaacaagaaaatggctgatgaagatgcc
ctgaggaagatccgggcagtagaggagcagatagaatacctgcagaagaagctggccatg
gccaagcaggaggaagaagctctcctctctgagatggacgtcacaggccaggcctttgaa
gacatgcaggagcaaaatatccgtttgatgcagcagttgagggagaaggatgatgcaaat
ttcaagctcatgtcagaacgtatcaagtccaatcagatccataagctgctgaaagaagag
aaggaggagctggcagaccaggttttgactctgaagactcaggttgatgcccagttacag
gtagtgaggaaactggaagagaaggagcatctgttacaaagcaacattggcacaggggag
aaggagctgggtcttaggacccaagccttagagatgaataaacgcaaggcaatggaggca
gcccagcttgcagatgacctcaaagcacagttggagttggctcagaagaagctacatgat
tttcaggatgagattgtggagaacagtgtcaccaaagaaaaagatatgttcaatttcaaa
cgggcccaggaggacatctctagacttcgaaggaagctggagaccacaaagaaaccagac
aatgtacccaaatgtgatgagattctgatggaggagattaaggattacaaggcacgcctg
acctgtccgtgttgcaacatgcgtaaaaaggatgctgtacttaccaagtgttttcacgtt
ttctgctttgagtgtgtgaagacccgctatgacacccgccagcgcaaatgtcccaagtgt
aatgctgcttttggtgccaatgatttccatcgcatctacattggttga
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