Globicephala melas (long-finned pilot whale): 115838787
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Entry
115838787 CDS
T11080
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115838787 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gmf01007
]
115838787 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmf03016
]
115838787 (RARS1)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115838787 (RARS1)
Enzymes [BR:
gmf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
115838787 (RARS1)
Amino acid related enzymes [BR:
gmf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
115838787 (RARS1)
Transfer RNA biogenesis [BR:
gmf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115838787 (RARS1)
Prokaryotic type
Other AARSs
115838787 (RARS1)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
115838787 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
115838787
NCBI-ProteinID:
XP_030685840
LinkDB
All DBs
Position
3:143492206..143528688
Genome browser
AA seq
660 aa
AA seq
DB search
MDGLVAHCSARLLQQEKEITFLTAEIDRLKNCSCSEASSNLEQLREENLKLKYRLNILQK
SLQAERSKPTKNMLNINSCLQEVFGCAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMG
ISQMLKTKEQKVNPREIAGNIIKHLPDNEYIEKVEIAGPGFINVHLRKGFVSQQLTNLLV
NGVKLPAIGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGD
WGTQFGMLIAHLQDRFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSK
NPDIIKAWKLICDVSRQEFNKIYEALDISLIERGESFYQDMMNDIVKEFEDRGFVQVDDG
RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQSLHFQTIF
GGAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEK
ERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLASIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFLHTLCDY
IYELATTFTEFYDSCYCVEKDRQTGEVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacggtttggttgctcattgctccgcgcggctgctgcagcaggagaaagagattacg
tttctgactgctgaaattgatcggttgaaaaactgcagctgttcagaagcttcttcaaat
ttggaacagttgcgggaagaaaatttaaaattaaagtatcggctgaatatccttcaaaag
agtcttcaagcagaaaggagcaaaccaactaaaaatatgcttaacatcaatagttgccta
caagaggtctttggttgtgccattaaggctgcctatccagatttggaaaatcctccactg
atagtgacaccaagtcaacagcccaagtttggggactatcagtgtaatagtgctatgggt
atctctcagatgctcaaaaccaaggagcagaaagttaatccaagggaaattgctggaaac
attatcaaacacctcccagacaatgaatatattgaaaaagttgaaattgctggtcctggt
tttattaatgtccacttaagaaagggctttgtatcacaacagttgaccaacctcttggtg
aatggtgttaaactacctgccattggagaaaacaaaaaggttgtagttgacttttcctct
cccaacatagctaaagagatgcatgtaggccatctcaggtcgacgatcataggagagagc
atgtgccgcctctttgagtttgcaggatataacgtgctgcgattaaaccatgtaggagat
tggggaacccagtttggcatgctcattgctcacctgcaagacagatttccggattaccta
acagtttcacctcccattggggatcttcaggctttttataaggaatccaagaagagattt
gataccgaggaggaatttaagaagagagcataccagtgtgttgttttgctccagagtaaa
aatccagacatcataaaagcttggaagcttatctgtgatgtctcccgccaagagtttaat
aaaatctatgaggcgttggacatctctttaatagagaggggagaatccttctatcaagat
atgatgaatgatattgtgaaggagtttgaagatagaggatttgtgcaagtggatgatggc
agaaagattgtgtttgttccaggatgttccataccattaaccatagtaaaatcagatgga
ggttatacctatgatacatctgacctggctgctattaaacaaagactgtttgaggaaaaa
gcagatatgatcatctatgtggtagacagtggacaatctttacacttccagacaatattt
ggtggtgctcaaatgattggttggtatgaccctgcagtaactcgagtgtctcatgctgga
tttggtgtggtactgggggaagacaagaagaagtttaaaacacgatcaggtgaaacggtg
cgcctcatagaccttctggaagaaggactaaaacgctccatggacaaattgaaggaaaaa
gaaagagacaaggtcttaaccacagaggaattgaaggctgctcagacatctgttgcttat
ggctgtatcaaatatgctgatctttcccataaccggttgaatgactatatcttctccttt
gacaaaatgctggatgacagaggaaatacagcggcttacttgttgtatgccttcactaga
atcaggtcaattgcgcgtctggccagtattgatgaagaaatgctccagaaagctgctcga
gagaccaagatcattttggaccatgagaaggaatggaaactaggccggtgcattttgagg
ttccctgaggttctgcagaagattttagatgacttatttctccacactctctgtgattat
atctatgagctggcaactactttcacagaattctatgatagctgctattgtgtggagaaa
gatcgacaaactggagaagtattgaaggtgaacatgtggcgtatgctgctatgtgaagca
gtagctgctgtcatggccaaggggtttgatatcctgggaataaagcctgtccaaagaatg
taa
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