Globicephala melas (long-finned pilot whale): 115838809
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Entry
115838809 CDS
T11080
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
115838809 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115838809 (TRIM71)
04121 Ubiquitin system [BR:
gmf04121
]
115838809 (TRIM71)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115838809 (TRIM71)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115838809 (TRIM71)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115838809 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
zf-B_box
DUF5128
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
115838809
NCBI-ProteinID:
XP_030685857
LinkDB
All DBs
Position
11:complement(51629320..51687293)
Genome browser
AA seq
871 aa
AA seq
DB search
MASFSETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGGAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAAAGAGGHSNHRHHAHHAHPRASASAPPPLPPAPQPPAPPRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPTAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPI
CRECTVGRHGGHSFVYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKA
KVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISA
VQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGF
VSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFG
AEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFG
SEGDSDGKLCRPWGVSVDKEGYIVVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPA
GVACDTSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVS
DTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPD
CQSARFLGSEGTANGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSG
FGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttctccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaactcgtcggcgtcgtcgtcgtcctcgcagacgtccacg
tcgtcggggggcggcggcgggggccccggggctgcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttttgccgcccgtgcctcgaggcgcaccggctgccggcggcgggcggc
ggcgcgccgggagagccgctcaagttgcgctgccctgtgtgcgaccagaaggtcgtgctg
gccgaggcggcgggcatggacgcgctgccctcgtccgccttcctgctcagtaacttgctc
gacgccgtggtggccacggctgacgagccgccgcccaagaacgggcgggccggcgccgcg
gcgggcgcgggcggccacagcaaccaccgacaccacgcgcaccacgcgcacccgcgcgct
tctgcctcggcgccgccgccgctcccgccagcgccgcagccgcccgcgccgccccgctca
gcgcccggcggccccgcggcctccccgtcggcgctgctgctgcgccggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgcctcgactgccaggagcacctg
tgcgacaactgcgtccgcgcgcaccagcgcgtgcgccttaccaaggaccactacatcgaa
cgcggcccgcccggccccacagccgccgccgccgccgcggcgcagcagctcgggctcggg
ccgcccttccccggcgcgcccttctccatcctctcggtcttccccgagcgcctcggcttc
tgccagcaccacgacgacgaggtgctgcacctgtactgtgacacgtgctcagtgcccatc
tgccgagagtgtactgtgggccggcacggcggccacagcttcgtctacctccaggaggcg
ctgcaggactcacgggcgctcaccatccagctgctggctgatgcccagcagggccgccag
gccatccagctgagcatcgagcaggcccagacggtggcagagcaggtggagatgaaggca
aaagtggtacagtcggaggtcaaagccgtgactgcgagacacaagaaggccctggaggag
cgggagtgtgagctgctgtggaaggtagagaaaatccgccaggtgaaagccaagtccctg
tacctgcaggtggagaagctgcggcaaaacctcaacaagctggagagcaccatcagcgcc
gtgcagcaggtcctggaggaggggcgggcgctggacatcctgctggcccgagaccgcatg
ctggcgcaggtgcaggagctcaagaccgtgcgcagcctcctgcagccccaggaggacgac
cgggtcatgttcacaccccctgaccaggccctctacctcgccatcaagtccttcggcttt
gtcagcagcggggccttcgcgccgctcaccaaggccacgggcgacggcctcaagcgggcc
ctccagggcaaggtggcctccttcactgtcatcggctacgaccatgacggggagccccgc
ctctcaggaggcgacctcatgtcggctgtggtcctgggccctgatggcaacctgtttggt
gcggaggtgagcgaccagcagaacgggacatacgtcgtgagctaccggccgcagctggag
ggcgagcacctggtatcggtcaccctgtgcaaccagcacatcgagaacagccccttcaag
gtggtggtcaagtccggccgcagctacgtgggcatcgggctcccgggcctgagcttcggc
agtgagggcgacagcgatggcaagctgtgccggccctggggcgtgagcgtggacaaggag
ggctacatcgtggtcgctgaccgcagcaacaatcgcatccaggtgttcaagccctgcggc
gccttccaccacaagttcggcactctgggctcccggcccgggcagtttgaccggcctgcc
ggcgtagcctgtgacacctcccgcaggatcgtggtggccgacaaggacaatcatcgcatc
cagatcttcacctttgagggccagttcctcctcaagttcggtgagaagggcaccaaaaac
gggcaatttaactacccttgggatgtggcggtgaattccgagggcaagatcctggtctcc
gacacgcggaaccaccggatccagctgttcgggcccgatggggtcttcctgaataagtat
ggcttcgagggggctctctggaagcactttgactccccgaggggggtggctttcaaccac
gagggccacttggtggtcaccgacttcaacaaccaccggctcctggtcattcacccagac
tgccagtcggcccgcttcctgggctcagagggcactgccaatgggcaattcctgcgccca
cagggcgtggccgtggaccaggaggggcgcatcatcgtggccgattccaggaaccaccgg
gtgcagatgttcgagtccaacggcagcttcctgtgcaagtttggcgctcagggcagtggc
tttgggcagatggaccggccctccggcatcgctgtcacgccggatgggatgattgtcgtg
gtggactttggcaacaatcgaatcctcatcttctaa
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