Globicephala melas (long-finned pilot whale): 115839055
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Entry
115839055 CDS
T11080
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115839055
Cell adhesion molecules [BR:
gmf04515
]
Cadherins
Protocadherins
115839055
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
115839055
NCBI-ProteinID:
XP_030686216
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Position
18:complement(25326425..25331125)
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AA seq
1158 aa
AA seq
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MICISAAIRPEAALGGAAPARKGEGEVWAVGGIHASSEPAGTSKLQPADLSRTRLAKSVL
WGPWDSRPDLQTREESLPQPFGIALGAGGMSPARRGGIPCLFPLQLFSLCWVLSVAQSKT
VRYSTFEEDAPGTVIGTLAEDLHMKVSGDTSFRLMKQFNSSLIRVREGDGQLTVGDAGLD
RERLCGQAPQCVLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVG
TRIPLEVPVDEDVGANGLQSVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAY
NLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAA
DPDEGPNGDVVFAFGSRTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGP
GPRAATCKVIVRIRDVNDNAPDIAITPLAAPGAPVASPFAAAAAALGGADATSSTGPGTP
EAGAISLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAG
SLDRERIAEYNLTLVAEDRGAPPLRTVRPYLVRVSDENDNEPLFTRPVYEVSVRENNPPG
AYLATVAARDPDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLR
QLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTARDTAV
ARVQARDADEGANGELAFDLLQQEPREAFAIGSRTGEIVLTGDLSQEPPGRVFRALLVVS
DGGRPPLSTTAAVSFVVTAGGGRGLVSPASAANSERSRPPGSRLATSGPALQWDTPLIVI
IVLAGSCTLLLAAIIAIATTCNRRKKEVRKGGPRREERPGAAGGGASAPGSPEEAARGAG
PRPNMFDVLTFPGSGKAPFGSPAADAPPPAVAAAEVPGSEGGSATGESSCHFEGQQRLRG
AHAEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISG
DALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCAGGPSTHASTHPPAQMSTFCKSTS
LPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLY
ESSPGRYLSPKKEDNENV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcatatcggctgctataagaccggaggcggcgctcggcggcgcagctccagcg
agaaaaggcgagggagaggtgtgggccgtgggcggcatccacgcgtcctcagagcccgcc
ggcacctccaagctgcagcctgcagacctctcccgcacacgcctcgcaaaaagcgtgctc
tggggaccctgggactcacgcccagacctgcaaaccagagaggaatcgctccctcagcct
tttggaatagcgctcggggctggcggcatgagtccagcgaggcgcgggggaatcccctgc
cttttccccctgcagctcttcagcctttgctgggtgctctccgtggcccagagcaagaca
gtgcgatacagcaccttcgaggaggatgcccccggaacggtcatcgggaccctggctgaa
gacctgcatatgaaagtgtccggagacacaagcttccgcctgatgaagcagttcaacagc
tcgctgatccgagtgcgcgagggcgacgggcagctgaccgtcggagacgcgggcctggac
cgcgagcggctgtgcggccaggccccgcagtgcgtgctggccttcgacgtggtcagcttc
tcgcaggagcagttccggctggtgcacgttgaagtggaggtgagggacgtcaatgaccac
gcgccgcgctttccccgggcccagatccccgtggaggtgtccgaaggcgcggccgtgggc
acgcgcatacccttagaggtgccggtggacgaggacgtgggcgccaatgggctgcagagc
gtgcgcctggccgagccgcacagccccttccgcgtggagctgcagacgcgcgcggacggt
gcccagtgcgccgacctggtgctgctgcaggagctggaccgcgagagccaggccgcctac
aacctggagttggtggcccaggacggaggccgcccgccgcgctccgccacggccgccctc
agtgtgcgcgtgctggacgcgaacgaccacagcccggccttcccgcagggcgccgtggcc
gaggtggagctggcggaggacgcgcccgtgggctcgctactgctcgacctggacgcggcg
gaccccgacgagggccccaacggcgacgtggtgttcgccttcggctcccgtaccccgccc
gaggcgcgccgcctcttccgcctcgatccgcgctcgggccgcctcaccctggccgggccc
gtggactacgagcgccaggacacttacgaactggacgtgcgggcgcaggaccgcggcccc
gggccccgcgccgccacctgcaaggtcatcgtgcgcatccgcgacgtcaatgacaacgcg
ccggacatcgccatcaccccgctggccgccccgggcgcgcctgtcgcctcgcccttcgcc
gccgccgccgctgctctcgggggtgcggacgcgacctcgtcgaccgggcccgggacgcca
gaggccggagccatctctctggtgccagagggggcggcacgcgagagcctggtggcgctg
gtcagcacctcggacagggactcgggagccaacgggcaggtgcgctgcgccctctatggg
cacgagcacttccgactgcagccagcctacgcgggcagctacctggtggtgaccgcgggg
tcgctggatcgcgagcgcatcgccgagtacaacctgaccctggtggccgaggaccgcggc
gctcccccgctgcgcaccgtacggccctacctggtgcgggtgagcgacgagaacgataac
gagccgctcttcacgcggccggtctacgaggtgtcggtgcgtgagaataacccgcccggg
gcttacttggccacggtggccgccagggacccggacctgggccgcaacggccaggtcacc
taccggctgctggaggccgaggttggccgcgctgggggcgccgtgtccacctatgtctcg
gtggacccggctaccggggccatctacgcgctgcgcagcttcgactatgagacgcttcgc
cagctcgacgtgcgcatccaggcgagcgacggcggctcccctcagctctccagcagtgcc
ctggtgcaagtgcgagtgcttgaccagaacgaccacgcaccggtcctggtgcacccggca
ccggccaacggctccctggaagtggcggtccccgggcgcacggcaagggacacggccgtg
gcgcgcgtgcaggcccgggacgcagacgagggtgccaacggggagctggcattcgacctg
ctacagcaggagccgcgagaagccttcgctatcggcagccgaacgggggagatcgtgctc
accggcgacctatctcaggagccgcccggccgagtattccgggcgttgctggtcgtatcc
gacggcggccggcccccgctctccaccaccgccgctgtcagcttcgtggtgacagcagga
ggcgggcgcgggctggtgtcgccagccagtgcagcgaactcggagcgctctcgccctccc
ggctctcggctcgcgacgtcggggccggcgctacagtgggacacgccgctgatcgtcatc
atcgtgctggccgggagctgcacgctgcttctggccgccatcatcgccatcgccaccacc
tgcaaccgccgcaagaaggaggtgcgcaaaggggggccccgccgggaagagcggcccggg
gcggcgggcggcggagcctcggctcccggctccccggaggaggccgcccggggagccggg
cccaggcccaacatgttcgacgtgctcaccttccctggcagcggcaaagcgccctttggc
agccccgcggccgacgcgcccccgcccgcggtcgccgcggccgaagtgccgggctcggag
ggcggcagtgccaccggggaaagctcctgtcacttcgaggggcagcagcggctccgcggc
gcgcacgccgagccctacggcgcctcccctggtttcggaaaggagccggcgccccctgtg
gctgtctggaaaggacattctttcaacaccatctccggccgagaagcggagaagttcagc
ggcaaagacagcggcaaaggggacagtgatttcaacgacagcgattccgacatcagcggg
gacgctctgaagaaggatctcatcaaccacatgcagagtggactgtgggcgtgcaccgcg
gagtgtaagatcctgggccactctgaccgctgctggagcccctcctgcgctggagggccc
agcacacatgcttccactcaccccccagcccagatgtcgaccttctgtaagagcacgtcc
ctgccccgggatcctctgcgtagggacaattactaccaggcccagctgcccaagacagtg
gggctgcagagcgtctatgagaaagtgctacacagagactatgacaggacagtcactctg
ctctcccctcctcgtccagggaggctcccagacttgcaggagattggggtacccctctat
gagtcctcccctggcaggtacctgtccccaaagaaggaagacaatgaaaatgtgtaa
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