Globicephala melas (long-finned pilot whale): 115839130
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Entry
115839130 CDS
T11080
Symbol
CAPRIN2
Name
(RefSeq) caprin-2 isoform X2
KO
K18744
caprin-2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115839130 (CAPRIN2)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115839130 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
115839130
NCBI-ProteinID:
XP_030686301
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All DBs
Position
10:77220961..77263183
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AA seq
1069 aa
AA seq
DB search
MVQLSSSPFGYQSPSGHSEEGKEGNMKSAKPQVNHSQHGESQRAMSPLQPVLGSAASPSQ
AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEF
AKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLMQEHVQKDF
KGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT
TYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLSKTESVKESESL
MELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQSWEADYARKPNLPKCWDVLTEPDGQEKK
QESFKSWESSVKHQEVSKPAVSLEQRKQEIPKLRSTLQEEQKKQDVSKTKATPSQWKQEA
LKSKVGYIQEEQKKQETPKPWPVQLQKEQDPKKQTPKSWTPSVQSEQDITKSWTTPTCEE
QDSRPPETPKSWENNVESQKHPLTTQSQISPKSWGVATASLIPNDQLLPRKFNTEPKDVP
KPMHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPPSAIPSSQPPSA
TPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSETPE
AAVPPSKKPSSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPR
KEQEIKESPYSPGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETASYPDGTIQVSNGSL
AFYPAQTNVFPRPSQPFVNSRGSVRGCTRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGN
YSQLQFQAREYPGTPYSQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFN
SGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIV
FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYAND
GAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaactctcttcatctccatttggttaccagtcaccttcaggccattcggaggag
ggaaaggaggggaatatgaagtcagccaagccccaagtgaaccacagtcagcatggggaa
agccagcgggccatgagccccttgcagcctgttctcggttctgctgcctctccttcccaa
gcatatgagacatatattgataatggactcatatgccttaaacacaaaatcagaaacatc
gagaaaaagaagctcaaactggaagattacaaggatcgcctgaaaaatggagagcaactt
aatccagaccagttggaagcagttgagaaatatgaagaagtgctacataacttagaattt
gccaaggagcttcagaaaaccttttctggactgagccaagatctgcttaaagcgcagaag
aaagcccagagaagggagcacatgctaaaacttgaggctgagaagaaaaagcttcgcact
atacttcaagttcagtatgtattacagaacttgatgcaggaacatgtacagaaagacttc
aaagggggcttgaatggtgcagtgtatttgcctttaaaagaacttgactacctcattaaa
ttttcaaaattgacctgtcctgaaagaaatgaaagtctgagtgttgaagaccagatggag
cagtcatccttgtacttttgggaccttttggaaggtagtgagaaagcagtggtaggaacg
acatacaaacacatgaaagatctactatctaaattgttgaactcaggctattttgaaagt
atcccagttccaaaaaatgctaaggaaaaagaggtatcattggaggaagaaatgctaata
aaatcagagaagaaaaaacaattatcgaagactgaatctgtcaaagagtcagagtctctt
atggaacttgcacagccagagatacaaccacaagagtttcttaacagacgctacatgacg
gaagtagattattcaagtaaacaagatgaagagcaatcttgggaagcagattatgctaga
aaaccaaatctccccaaatgttgggatgtgcttaccgaaccagatggtcaggagaagaaa
caggaatccttcaagtcctgggagtcttccgtgaagcaccaggaggtatcaaagcctgca
gtttccttagaacagaggaaacaagagattccaaaactcaggtccactctgcaggaagag
cagaagaagcaggatgtctcgaaaaccaaggcaactcctagccagtggaagcaagaagct
cttaaatccaaagtgggatacattcaagaggaacagaagaagcaggagacaccaaagcct
tggccagttcagctgcagaaagaacaggatccaaagaagcaaactccaaagtcttggaca
ccttctgtgcagagtgaacaggacatcaccaagtcatggaccactcccacgtgtgaagaa
caggattcaagaccgccagagactccaaaatcctgggaaaacaatgttgagagtcaaaaa
caccctttaacaacacaatcacagatttctccaaagtcctggggggtagctacagcaagc
ctcataccaaatgaccagctgctgcccaggaagtttaatacagaacccaaagatgtgcct
aagcctatgcatcagcctgtaggttcttcctctacccttccaaaggatccagtattgagg
aaagaaaaactgcaggatctgatgacccagattcaaggaacttgtaactttatgcaagaa
tctattctggattttgacaaacctccaagtgcaattccatcatcacagccgccttcagct
actccaggtagcccagtagcatctacagaacaaaatctatccaatcaaagtgattttctt
caagagccattacaggctgcttcttctccagttacttgtagctcaaatgcttgcttggtt
actaccgatcaggcctcttcaggatctgaaacagagtttatgacctcagagactcctgag
gcagcagtacccccaagcaagaaaccgtcttcactagcttctccaaatcctcccatgtca
aagggctctgaacagggcttccagtcacctccagcaagtagtagttcagtaaccattaac
acagcaccctttcaagccatgcagacagtatttaatgttaatgcacctctgcctccacgt
aaagaacaagaaataaaagaatccccttattcacctggctacaatcagagttttactaca
gcaagtacacagacaccaccccagtgccaactgccagctatacacgtagaacaaactgtc
ctttctcaagagactgcaagttatcctgatggaactattcaagtaagcaatggtagcctt
gccttttacccagcacagacgaatgtatttcccagaccctctcaaccatttgtcaatagc
cggggatctgttagaggatgtactcgtggtgggagattactaaccaattcgtatcggtcc
cctggtggttataaaggttttgatacctatagaggacctccttcaatttccaatggaaat
tatagccagctacagttccaagctagagagtatcctggaacaccttattcccaaagggat
aatttccagcagtgttacaagcgaggaggaacatctggtggtcctcgggcaaattctaga
gcagggtggagtgattcttctcaggtgagcagcccagaaagagacaacgaaacctttaac
agtggtgactctggacaaggagactcccgtagcatgacccctgtggatgtgccagtgaca
aacccagcagccaccatactgccagtacacgtgtatcccctgcctcagcagatgcgagtt
gccttctcagcagccagaacctccaatcttgcccctggaactttagaccaacctattgtg
tttgatcttcttctgaacaacttgggagaaacttttgatcttcagcttggtagatttaat
tgcccagtgaatggcacttatgttttcatttttcacatgctaaagctggcagtgaatgtg
ccactgtatgtcaacctcatgaagaatgaagaggtcttggtatctgcctatgccaatgat
ggtgctccagaccatgaaactgctagcaatcatgcaattcttcagctgttccagggagac
cagatatggttacgtttgcacagaggagcaatttatggaagtagttggaaatattctacg
ttttcaggctatcttctttaccaagattga
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