Globicephala melas (long-finned pilot whale): 115839258
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Entry
115839258 CDS
T11080
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04110
Cell cycle
gmf04218
Cellular senescence
gmf04350
TGF-beta signaling pathway
gmf05165
Human papillomavirus infection
gmf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115839258 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115839258 (RBL1)
04218 Cellular senescence
115839258 (RBL1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
115839258 (RBL1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
115839258 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115839258 (RBL1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
115839258 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
115839258
NCBI-ProteinID:
XP_030686507
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Position
15:complement(64356190..64432089)
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AA seq
1068 aa
AA seq
DB search
MDEDDPHSEGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLA
CSLYVACRKSIIPTVGKGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRE
RIERLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCSVKELFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHTADFR
ASEEPPCIIPVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSK
AVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDAPLGKLTAQANVECNLQQHFE
KKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCM
RNPMENIMKTVKLIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQET
RRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSSPRTFPWIIQVLNLRPFYFYKVIEVV
IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANRVPTCEEVIFPNNFETG
NGGNVQGHLPMMPMSPLMHPRVKEVRTDSGSLRKDTQPLSPISVHERYSSPTAGSAKRRL
FGEDPPKEMLMDRIITEGTKLKIAPSSSITAENISISPGQSLLTMATAIVTGTTGHKVTI
PLHGIANDAGEITLIPISMNTTQESKVESPVSLTAQSLIGASPKQTHLTKAQEVHSVGIS
KPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHL
DQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVTYNKNLNG
DFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEA
PPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTTRSALLYKFNGSPSKSLKDINNM
IRQGEQRTKKRAIAIDGDAESPAKRLCQENDDVLLKRLQDVVSERANH
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacgatccccactctgagggggcggcggtggtcgccgcggccggggaggcg
ctgcaggccctgtgccaggagctgaacctggatgaggggagcgcggccgaagccctggac
gacttcaccgccatccggggcaactacagcctagagggagaagttatccactggttggca
tgttcattatatgtcgcttgccgcaaaagcattattcccacagttggaaagggtatcatg
gaaggaaattgtgtttcacttaccagaatactacgttcagctaaattaagtttaatacag
ttttttagtaaaatgaagaagtggatggacatgtcaaacttgccacaagaatttcgtgaa
cgtatagaaaggctagaaagaaattttgaggtgtctactgtaattttcaaaaaatttgag
ccaatttttttagatatatttcaaaatccatatgaagagccaccaaagttaccacgaagc
aggaagcagaggaggattccttgcagtgttaaggagctctttaatttctgttggacactc
tttgtttatactaagggtaattttcgtatgattggagatgatttagtaaactcttatcat
ttacttctgtgctgcttggatctgatttttgccaatgccattatgtgcccaaatagacga
gacttgctaaatccgtcatttaaagggttaccatctgatttccatactgctgactttagg
gcttctgaagaacctccctgcatcattcctgtactgtgtgaactacatgacggacttctg
gtagaagccaaaggaataaaggagcactactttaagccatatatttcaaagctctttgac
aggaagattttaaagggagaatgccttctggacctttctagttttactgataatagcaaa
gcagtgaacaaggagtatgaagaatatgttttaactgttggtgactttgatgagaggatc
tttttgggagcagatgcagaagaggaaattggaactcctcgaaagttcactggtgatgcc
ccattagggaaactgacagcacaggctaatgtggagtgtaaccttcaacaacactttgaa
aaaaaaacatcatttgcaccttctacaccactgacaggacgacgatatttaagagaaaaa
gaagcagtcattactcctgttgcttcagccacccaaagtgtgagccggttacagagtatt
gtggccggactgaaaaatgcaccaagtgaacaacttataaacatttttgagtcttgtatg
cgtaatcctatggaaaacattatgaaaacagtgaaactaataggagagactttctgccaa
cactatacccaatcaacagatgaacagccaggatctcacatagattttgctgtaaacaga
ctaaagcttgcagaaattttgtattataaaatattagagactgtaatggttcaggagaca
cgaagacttcatggaatggacatgtcagttcttttagagcaggatatatttcatcattcc
ttgatggcctgttgtttggaaattgtgctctttgcctatagctcacctcgtacttttccc
tggattattcaagttcttaatctgcgaccattttatttttataaggttattgaggtggtg
atccgctcagaggaaggactctccagggacatggtgaaacacctgaacagcattgaagaa
cagattttggagagtttagcatggagtcatgactctgctctgtgggaggctctccaggct
tctgcaaacagagttcctacctgtgaagaagttatattcccaaataattttgaaacagga
aacgggggaaatgtacagggacatcttcccatgatgccaatgtctcctctaatgcatcca
agggtcaaagaagttcggactgacagtgggagtcttcgaaaggatacgcaaccattgtct
ccaatttctgtccatgaacgctacagttctcctaccgctggcagtgctaagagaagactt
tttggggaagaccccccaaaggaaatgcttatggacaggatcataacagaaggaacaaaa
ttgaaaattgctccttcttcaagcattactgctgaaaatatatcaatttcacctgggcaa
agtcttctaacaatggccacagccatagtaacagggacaacaggacataaagttacaatc
ccattgcatggtattgcaaatgatgctggagagatcacactgataccaatttccatgaat
acaactcaggagtccaaagtcgagagtcctgtatcacttacggctcagtcattaattggt
gcttctccaaaacagacccatttgactaaagcacaagaggtacattcagttggaataagc
aaaccaaagagaactgggtccttagcactgttttatagaaaggtctatcatttggcaagt
gtacgcttacgtgatttatgtttaaaactggatgtttcaaatgagttaagaaggaagata
tggacatgttttgaattcactttagttcactgccctgatctgatgaaagacagacatttg
gatcagctcctcctttgtgccttctacatcatggcaaaggtaacaaaagaagaaagaact
tttcaagaaataatgaaaagttataggaatcagcctcaagctaatagtcatgtttacaga
agtgtactgttgaaaagtattccaagagaagttgtgacatacaataaaaacctaaatggt
gattttgaaatgacagattgtgatttggaagatgctacaaaaacacctgactgttccagt
ggaccagtgaaagaggaaagaggtgatcttatcaaattttacaatacaatatatgtagga
agagtgaagtcatttgcattgaaatacgacttgtcaaatcaggaccatgtgatggaagct
ccaccactctctccttttccacatattaagcaacagccaggctctccgcgccgcatttcc
cagcagcactccatttatgtgtccccacacaaaaatgggtcaggccttacaacaaggagt
gctctgctctataagttcaatggcagcccttctaagagtttgaaagatatcaacaacatg
ataaggcaaggtgagcagagaaccaagaagcgagcaatagccatcgatggtgatgcagaa
tcacctgccaaacgcctctgtcaagaaaatgatgacgttttacttaaacgactacaggat
gttgtcagtgaaagagcaaatcattag
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