Globicephala melas (long-finned pilot whale): 115839419
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Entry
115839419 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmf04040
]
115839419
Ion channels [BR:
gmf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115839419
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
115839419
NCBI-ProteinID:
XP_060160323
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All DBs
Position
8:complement(49429569..49447638)
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AA seq
897 aa
AA seq
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MEKWKGEGGPKAKEVGDSGSHPLYSFIQPQPKWTEIVNRRLKFPPPLLGAIXDLVXQLLE
LWVETTDGGSGGPLQNVEEAEDHCWREALNLAIHLGHKAISGVLLASVKFDFRQIHEALL
VAVDTNQPAVVRRLLAWLEWEKGRKVDTRSFSLAFFDSSVDGPRFAPGVTSLTLACQKDL
YEIAQLLMDQGHSIARPHPVSCACLECSNTCCCDLQFSLSRINTCHGIASCAHLSLASED
AMLAAFQLSCELRRLAHKEPEFKPEYIALESLSQDYGFELLGMCQNQSKVTAVLDDLGED
SKTEPKAEGLDQAFEESIPNLARLRLAITYNQKWFVAPPICQQVLSSIWHGSLAGWRGST
SIWKLFVAFLIVLTTPFLCLGHWLAPKSRLGCLMKIPVLKFLLHSASYLWFCIFLLGESL
VMETQLSTFRGRSHSVWETSLRMVWVAGFLWFECKEVWIEGLCSYLLDWWNILDTVVLSL
YLAAFVLLAGLAYRRCRDALDGAACRYFTSAERREWRTEDHEFLAEVLFXFTHLAYVLPA
HESLGILQISIGRMMDDMIWFMFILTIILTAFLCGLNNIYVPYQETERLGNFNETFQFLF
WTMFGMEEHSVVDMPQFLVPELVGQALYGIFTIVLVIALLNMLIAMITSSFQETEDAADV
EWKFACSKLYLSYFREGLTLPVPFSILPSPKATFYLLRRIFLFICCCCSCCKAKKPASPP
IPTFANPGAGAGPGEEERGSYWLHVIKALVQRYIETARGEFEETRRKNLGNRLTELTKTV
SRLQSEVAGVQRTLVEGRLRRPPDGASILCRSISRVCNSFQNLGPPIPENPELTVPGIVG
TQVSSETGLQDAGRARTPASGESGPSSPAHVLGHREQESEGAGDVPQEEDLGTKEGS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtggaagggtgagggaggccccaaagcaaaggaggttggagactcggggtcc
caccctctctactccttcatccagcctcagcctaagtggaccgagatcgtgaacagaagg
cttaagttcccacctccgctgctgggtgccattnnggacctggtgtagcagctgctggag
ttgtgggttgagaccacagacggcgggtcaggcgggcccctgcagaatgtggaggaggct
gaggaccactgctggagggaggcgctcaatctggccatccacctgggccacaaggccatc
agtggtgtgctgttggccagtgtcaagttcgacttccggcagatccacgaggccctgctg
gtggctgtggacacaaaccagccggcagtggtgcgtcgcctgctggcctggctggaatgg
gagaagggccgcaaggtggacaccaggtctttctcactggccttctttgactcatcagtc
gatggcccccgctttgcccctggtgtcacctccctcaccctggcctgccagaaggacctg
tatgagatcgcccagctgctcatggaccagggccacagcatcgcccggccccaccctgtc
tcctgtgcctgcctcgagtgcagcaacacatgctgctgtgatctccagttctccctgtcc
cgcatcaacacctgtcatggcattgccagctgcgcccacctctcactggccagtgaggac
gccatgctggctgccttccagctcagctgcgagctcaggcgccttgcccacaaggagcct
gagtttaagcctgagtacattgccctggagtcactgagccaggactatggctttgaactg
ctgggcatgtgccagaaccagagcaaggtcactgcggtgctcgatgacttgggcgaggac
agcaagactgagcccaaggccgagggtctggaccaggcctttgaggaaagcatccccaac
ctggcgaggctgcgactggccatcacctacaaccagaagtggtttgtagcaccccccatc
tgccagcaggtcctgtcctccatctggcatgggagcctcgctggctggcgtgggagcacc
agtatctggaagctctttgtcgccttcctcatcgtcctcaccacgcccttcctctgcctt
ggccactggctggcacccaagtcccggctgggctgcctgatgaagatcccggtgctgaag
ttcctgctgcactcggcctcctatctgtggttctgcatcttcctgctgggagagtccctg
gtcatggaaacacagctgagtaccttccgaggccgcagccacagtgtctgggagacttca
ctacgcatggtttgggttgcaggcttcctgtggtttgagtgtaaggaagtgtggatcgag
ggcctgtgcagttacctcctggactggtggaacatcctggacacggtcgtcttgtccctg
tacctggcggccttcgtgctcctggccgggctggcctacaggcgctgccgggatgccctg
gacggggctgcctgccgctacttcacctcggctgagcggcgtgagtggcgcacggaagac
cacgagttcctggctgaggtgctctttngcttcacccacctggcctacgtcctgccggcc
catgagtcgctgggcatcctgcagatttccattggcaggatgatggacgacatgatctgg
ttcatgttcattctcacgattatcctgaccgccttcctctgcggcctcaacaacatctac
gtgccttaccaggagacagagcggctgggcaatttcaacgagaccttccagtttctgttc
tggacgatgttcggcatggaggagcacagtgtggttgacatgccccagtttctggtgccg
gaactggtgggccaggccctctacggtatctttaccatcgtcctggtcattgcgctgctc
aacatgctcattgccatgatcaccagctccttccaggagactgaggatgctgctgacgtg
gagtggaagtttgcttgctccaagctctacctgtcctacttccgagagggcctgacgctg
cccgtgcccttcagcatcctgccctcccccaaggctaccttctaccttctcaggagaatt
ttcctcttcatttgctgttgctgctcctgctgcaaagccaagaagccagcctctccccca
atccccacctttgccaatcctggggcaggggcagggcctggggaggaagagcgtggatcc
tactggcttcatgtcatcaaggctctggtacagcgctacatagagactgcgcggggggag
tttgaggagacccgtcggaaaaacctgggcaacagactgacagagctgaccaagacagta
tctcgactgcaaagcgaggtagccggtgtgcagcggactctggtggagggaaggctgcgc
cggccaccagacggtgccagcatcctctgtcgctccatcagccgagtgtgcaacagcttc
cagaacctgggccctcccatccctgagaacccagagctgacagtgccagggattgtgggg
acccaggtgtcttcagaaactgggcttcaggacgcaggcagggccaggactccagcatct
ggagagtctggcccctcctccccagctcacgtgctagggcacagggagcaagaatcagag
ggggctggggacgtgccccaggaggaagatctgggaaccaaggaggggtcctga
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