Globicephala melas (long-finned pilot whale): 115839483
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Entry
115839483 CDS
T11080
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X3
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03013
Nucleocytoplasmic transport
gmf05014
Amyotrophic lateral sclerosis
gmf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115839483 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115839483 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115839483 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115839483 (NUP98)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115839483 (NUP98)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115839483 (NUP98)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115839483 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
115839483
NCBI-ProteinID:
XP_030687014
LinkDB
All DBs
Position
8:49298173..49397423
Genome browser
AA seq
1800 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSSGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTGFGTSTTGFGTNPGGLFGQQNQQATSLFSKPFAQAITTQTTGF
SFGNTNTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTSTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPGPGTLGAGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPESAGNK
HNSSNSVDDTIVALNMHAALRNGLEGSSEETSFHEESLQDDREEIENNTYHMHPAGIVLT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATP
FQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVLDSMLEESVPEDQEPVSAS
THIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSRLPSKADTSQEICSPRLPISATH
SSKSRSLVGGLLQSKFASGTFLSPSASLQECRTPRTSSLMNIPSTSPWSVPPPLTSVFTV
PSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDLALFMGRSFRVGWGPNWTLANSG
EQLSGPQELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKLDEDLQLYQT
SLELKLKHSTVHVDELCPLIVPNPGVAIIHDYADWVKEASGDLLEPQIVKHWSLTWTLCE
ALWGHLKELDSQLDEPTEYIQILERRRAFSRWLSHTAAPRIEEEVSLTRKDNPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQEERLR
IFALLAGKPVWQLSEQKQINVCSQLDWKRSLAIHLWYLLPPTASISKALSMYEEAFQNTS
EGDRYACCPLPSYLEDSGFVVEEEQDSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSITA
DPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSSM
REKAVRELLTRHCQLLETPESWAKEIFLTEKLCVPAEWIHEAKAVRAHMESDRHLEALYL
FKAGHWNRCHKLVIQHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYI
RVIEMLHHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRVANLLRV
VLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcaccggtggctttggcacagct
tcaacatttgggcagaatactggttttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaataccggaggcctgtttggaaattcacagaccaaaccagga
ggcttatttggtaccaattcatttagccagccagctacctccacaagcagtggctttggg
tttggcacatcaacaggaacatcaaacagcttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaacaggctttgggaatttt
ggaacaagtaccagcagcgggggactttttggaactacaaataccacctctaatcctttt
ggtagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaaccctccaactggtacagatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcccta
gaggagcttcgtttagaggattatcaggccaaccggaaaggcccgcagaaccaggtggga
gcaggtaccacgactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagttcttccactacaaattcaggctttgcctatggtcagaacaaaacaggctttgga
actagtacgactggatttggaacaaatccaggtggtctttttggccaacagaatcagcag
gctaccagcctcttcagcaaaccatttgcccaggccataaccacccagaccactggcttt
tcctttggtaataccaacacactaggacagccaagcaccaacaccatgggtttatttgga
gtaacccaagcctcacagccgggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacgggaacaggtctctttgggcagaccagtactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcgtttggtacaaccagtggcgggctctttgggtttggcacaaataccagtgggaat
agtatttttggaagtaaaccaggacctggaactctgggagccgggcttggtgcaggattt
ggaacagctcttggtgctggacaagcatctttatttgggaacaaccaacctaagatcgga
gggcctcttggtacaggagcctttggggcccctggatttaatactacgacagccactttg
ggctttggagccccccaggccccagtagctttgacagatccaaatgcttctgctgcccag
caggctgttctccaacagcacatcaatagtctgacatactcaccttttggagactctcct
ctcttccggaatcccatgtcagacccgaagaagaaagaagagagattgaaaccgacaaat
ccagcagcccagaaggctctcacaacacctacgcattataaactgacaccccgccctgcc
accagagtccgaccgaaggctttacaaacaacaggcacagccaagtcacacctcttcgat
gggctagatgacgatgaaccatccttagccaatggagcattcatgcccaagaagagcatt
aagaagttggttttgaaaaaccttaacaatagcaatctcttctctcctgttaatcgtgat
tcagaagatctagcttcaccatctgattatccagaaaatggagagagattcagttttctg
agcaaaccagtcgatgaaaaccatcagcaggatggagatgatgattctcttgtgtcacgt
ttttatactaaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaa
cataacagcagcaacagtgtggatgataccattgttgcgttaaacatgcatgctgccttg
cgaaatgggctggaaggaagcagtgaagagacctcttttcatgaggagtcacttcaggat
gaccgagaagaaatagaaaataatacttaccatatgcatccagcaggcatcgttctcact
aaggttggctactatactattccatccatggatgacctagctaaaattaccaatgaaaaa
ggagagtgcattgtctctgacttcactattggtcgtaaaggttatggttcaatctatttt
gaaggagatgtgaatttgacaaatctaaatttagatgacattgtgcatatccgaaggaaa
gaagtgattgtttacttagatgataaccaaaaaccacctgtgggtgaagggctaaatagg
aaggctgaagttacattggatggagtttggccaacagataaaacatctcgttgtttaata
aagagcccagatcgacttgctgatatcaactatgagggaagattggaagcagtttcaagg
aaacagggagctcagttcaaagagtaccgtcctgaaactggttcttgggtatttaaggtc
tctcatttttctaagtatggccttcaggattctgatgaagaggaggaggaacggccatcc
aaaactagtacaaagaagttgaagactgcccctttacctcctgcaggccaggccacccca
ttccagatggctcttaatggcaaaccagcacctccgccccagagccagagcccagaggtg
gagcagttagggagggttgtggaactggacagtgacatgatagatatcacccaggagcca
gttttggattccatgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcctca
acacacattgcgtcttcactgggaattaatccacatgtcttacagatcatgaaagcatca
ttgcttgctgatgaagaagatgtagatatggtcctggatcaacgcttcagtcgccttcct
tctaaagcagatacgtctcaagaaatctgttctcccaggctccccatttcagcaactcac
tcatcaaaatcccgttcattagtaggtgggttactacaatcaaaatttgcaagtggaact
tttctttcaccaagtgcctctttacaagagtgtcgcactcccagaacatcgtcattgatg
aatattccatccacatccccttggtctgtccctccacccctgacctctgtgtttacggtg
cccagcccagcacctgaggttcagttgaaaacagtgggtacacgcagacaaccaggccta
gtccctcttgaaaagtctgtcacctatggaaaggggaaactcctgatggacctggccctg
tttatgggacgctcatttcgggttggttggggccctaactggactcttgctaatagtgga
gaacagctgagtggccctcaggaactggaaaatcatcagattgctgattctatggaatat
ggattcctgcctaatccagtagctgttaaatccctaactgagtctccattcaaagttcat
ttggaaaaactcagtttgaggcaaaagaagctggatgaagacctgcaattataccagaca
tctctggagcttaaattaaaacatagcactgtccatgtggatgagctgtgtcctctcatt
gtccccaatccgggagttgctatcattcatgactatgcagattgggttaaggaagcatca
ggagacttactggaaccacaaattgtgaagcactggagcctaacgtggacattatgtgaa
gctctatggggccacctgaaggagcttgacagccagctggatgagcccactgaatacatt
cagattctggagcgaagaagagctttctctcgctggctgtcccatacagctgcacctcga
attgaggaggaagtctccctaacccgaaaagacaaccctgtggaggctgtcttcagctac
ctcacgggcaagaggatcagtgaggcctgctccctggcccagcagtcaggtgatcatcgt
cttgcccttcttttatcccagttggttggcagccagtcggtccgggagctgcttactatg
cagctggtagattggcatcagctccaggctgactgtttcatccaggaggagagactgcgt
atctttgccctcttggctggaaaaccggtatggcagctctcagagcagaagcaaatcaat
gtatgctcacagttggattggaaaaggtccctggctatccatctttggtatttgctccca
ccaacagcctccatttccaaggcactcagcatgtatgaagaagcatttcagaatacctct
gagggtgacagatatgcctgctgcccacttccctcatacctggaggactctggctttgtg
gtagaggaggagcaagactcacagagacctcttcaagatgtctgctttcaccttctaaaa
ctctatagtgacagacattatgatctcaaccagctgctggagcctcgaagcataacagca
gatcctttggactaccgtctaagctggcacttgtgggaggtgctacgggctcttaactac
acccatctctcagagcagtgtgagggtgtgctgcaggccagttatgctggccagctggaa
agtgaggggctctgggagtgggccatctttgtcctcctgcacattgacaactcaagcatg
cgtgagaaggctgttcgagagctgcttacgcggcactgccaactgttggagacccctgaa
tcgtgggctaaggagattttcctgacggagaagctctgtgtgcctgctgagtggattcat
gaggccaaagcagtgcgagcacacatggaatccgacaggcacttggaggccctctattta
tttaaagcggggcactggaaccgctgccacaaactcgtcatccagcacttagcttctgat
gccattattaacgagaactatgactacctgaaggggttcttggaagacctggcacccccg
gagcgcagcagcctaatccaggactgggagacatctgggcttgtttacctggactacatt
cgggtcatcgaaatgctccatcatatacagcaggtggattgctcaggttatgagctagag
cagttacataccaaagtgacctcactgtgcaaccggatagagcagatccagtgttacaat
gccaaggatcgcctggctcagtcagacatggccaaacgtgtagccaacctgctgcgggtg
gtactgagccttcagcatgcccctgatgcaacctccgactcaacgccagaccctcagcga
gtccctttgcgcctgttggctccccacattggccggctccccatgcctgaggactatgcc
ttggaggaactgcgcagtctcacacagtcctacctgcgggaactgactgtggggagccag
tga
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