Globicephala melas (long-finned pilot whale): 115839820
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Entry
115839820 CDS
T11080
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II
KO
K06558
macrophage scavenger receptor 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115839820 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115839820 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmf04090
]
115839820 (MSR1)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Phagocytosis
Scavenger receptors
115839820 (MSR1)
CD molecules [BR:
gmf04090
]
Proteins
115839820 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
CENP-F_leu_zip
Glyco_transf_11
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
115839820
NCBI-ProteinID:
XP_060147583
LinkDB
All DBs
Position
21:18342028..18409864
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AA seq
454 aa
AA seq
DB search
MEPWESFPNQQEDTNSCTESVKFDAHSMTALLPPNPKNGPTLQEKMKSFKAALIALYLLV
FVVLVPIIGIVAAQLLKWEMKNCTVGSVNANDISPSLAGKGNDSEDAMRFREVIMEHMSN
VEKRIQYLSDNEANLIDAKNFQNFSVTTDQRFNDVLFQLSSLLSFIQGHGNVIGEVSKSL
ISLNTTLLDLQLSIATLNAKVQENAFKQQEEMSKLDERVYNTSAEIKSLEEKQVHLEQEI
KGEVKLLNNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDRGPTGEVGPQGIPGPVG
PPGLKGDRGSIGFPGSRGFPGSAGKTGRPGNSGQKGQKGEKGSGSVLTPSKTVRLVGGNG
PHEGRVEIFHDGQWGTVCDDRWELRGGQVICRSLGYQGARNVHKGAYFGQGTGPIWLNEV
FCFGRESSIEECKIRQWGVRVCSHAEDAGVTCNT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgtgggagagctttcccaatcaacaggaggacactaatagctgtacagaatct
gtgaagtttgatgctcactcaatgaccgctttgcttcctccgaatcctaaaaatggccca
actcttcaagagaaaatgaagtctttcaaagctgcactgattgccctttatctccttgtg
tttgtagttcttgtacctatcatcggaatagtggcagctcaactcctgaaatgggaaatg
aagaattgcacagttggttcagttaatgcaaatgatatatctccaagtctcgcaggaaaa
ggaaatgacagtgaagatgcaatgagatttcgagaagtcattatggaacacatgagcaat
gtggagaagagaatccagtatctttcagataatgaagccaatctcatagatgccaagaat
ttccaaaatttcagtgtaacaaccgatcaaaggtttaatgacgttcttttccagctaagt
tccttactttccttcatccagggacatggaaatgtaataggtgaagtctccaagtcatta
ataagtctgaacaccacactgcttgatttgcagctcagtattgcaacactgaatgccaaa
gtccaagagaatgcatttaaacaacaagaggagatgagtaaattagacgagcgtgtgtac
aatacgtcagcagaaattaagtctctggaagaaaaacaagtgcatttggaacaggaaata
aaaggagaagtgaaactgttgaataacatcactaatgatctcaggctgaaggattgggaa
cattctcagacactgaaaaatatcactttaattcaaggtcctcctggacctccaggtgaa
aaaggagatagaggtcccactggagaagttggtccacaaggcattccaggtccagtaggt
cctccaggtcttaaaggtgatcgaggatccattggttttcctggaagtcgaggattccca
ggatcagcggggaagaccgggaggccaggaaattctggacaaaaaggccagaagggggaa
aaagggagtggaagcgtgctaacaccgtctaagacagttcgactggttggtggtaacggc
cctcacgaaggcagagtggaaattttccatgatggccagtggggtacagtttgtgacgac
cgctgggaattgcgtggaggacaggtcatctgtaggagtttgggataccaaggtgctcga
aatgtgcataagggagcttattttggacaaggtactggtccaatatggctgaatgaagta
ttttgttttgggagagaatcatctattgaagagtgtaaaattagacaatggggtgtgaga
gtctgttcacatgctgaagatgccggggtcacttgcaatacataa
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