Globicephala melas (long-finned pilot whale): 115839945
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Entry
115839945 CDS
T11080
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05202
Transcriptional misregulation in cancer
gmf05206
MicroRNAs in cancer
gmf05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
115839945 (ZEB1)
05206 MicroRNAs in cancer
115839945 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
115839945 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115839945 (ZEB1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115839945 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2HE
Zn_SUZ12
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
115839945
NCBI-ProteinID:
XP_030688124
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All DBs
Position
2:2968570..3163325
Genome browser
AA seq
1114 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGAPED
GLPTDQAVLPGSSAREGDVKSCWEDDAGKEGQEILGPEARADEVGGTVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCPSPSLSASPGSPTRPQIRQKIENKPFQEQLSVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGGPLQATSTPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETISASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DISALPELKHYDLKQPAQPHLPPAPEGAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQTGQTSVQSSEASSPEPGKANIPAKND
DQPQPTNADESQDGTRNLQSPLKITGSPVLPVGSAVNGSRGSASSPSPLNLSSSGNAQGY
SYPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTLLIP
QVAYTYSTAVSPAAQEAALRAAQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHTRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEGPEPGAAGPGGPPTHHAGARASPSQGDS
DERESSTREEDEDSDKEEEEEEEEREMEDLQEEKESGGPQGGEGREGEGREGEGRANSEE
GAREGAGAGSPAHSLEHKVSQGAEQVSEEKTNEA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaactataatactgtggtagaaacaaattcagattcagacgatgaagacaaactccac
attgtggaagaagaaagtatcacggatgcggcagattgtgaaggtggcgccccagaagac
ggcctgccgacagaccaggcagtgctgcctgggagcagcgcaagggaaggggacgtgaag
agctgctgggaagacgatgcaggaaaggaaggacaagaaatcctggggcctgaagctcgg
gcagatgaagtgggaggtacagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcccaacgttgaagagttcctgcagcaacaagacactgcagtcatctac
cccgaggcgcccgaggaggaccagaggcagggcacgccggaggccagcgggcacgatgaa
aacggaacaccagatgcattttcccagttactcacctgcccatattgtgacagaggatat
aaacgctttacctctctgaaagaacacattaaatatcgccatgaaaagaacgaagacaac
ttcagttgctccctgtgcagttacacctttgcgtacagaacccagctcgaacgtcacatg
acctcccacaaatcaggaagagatcaaagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tccggttcctatagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcgaccacgaacagggctcaagacctcgcagtgtccctcaccatctctctcggcatca
ccaggcagtcccacgcgaccacagatacggcagaagatagagaataagcccttccaagaa
caactttccgtaaaccaaatcaaaacggagcctgtggattatgagttcaagcccatagtg
gttgcttcaggaatcaactgttcaacccctttacagaatggggttttcagtggtggtggc
cccttgcaggcaaccagtactcctcagggtgtggtgcaagccgttgttctgccaacggtg
gggttggtgtcccccatcagtatcaatttaagtgatattcagaatgtacttaaagtggca
gtagatggtaatgtaatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcagcgcttcatccatccagcaaggtggccattctgttatttcagcc
atcagtcttcctctggtggatcaagatggaaccaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttaaaaaaagaaaatccagtcccc
accaacagttgcaaaagtgaaaagttaccagaagatcttactgttaaatctgagaaggac
aaaagctttgaaggaggagggaacgacagcacttgcctcctgtgtgacgactgtccaggg
gacatcagcgcacttccggagctaaagcactatgacctgaagcagcccgcccagccccat
ctgccccccgcgccagaaggtgccaagcccgaggcctctgctccctcggggtccggagac
ggcagcctgtctcccagccagccacctttaaagaacctcctgtctcttctgaaagcatat
tatgctctgaatgcacagccaagtgcggaagagctctcaaaaattgctgactcagtgaac
ctaccgccggatgtagtgaaaaagtggtttgaaaagatgcagacgggacagacgtcagtg
cagtcttctgaggcatcttctcccgagccaggcaaagccaacatccctgctaagaacgat
gaccagcctcagcccacaaacgcagatgaatcccaggacggcacgaggaatctccagagt
cctctgaagataaccggctcccccgtcctaccagtgggctccgcggtcaacggttccaga
ggcagcgcatcgtccccatcccccctcaacctctcctcctccggaaacgcacagggttac
tcgtacccggcagaaggggcacaggaggagccacaggtcgaacctcttgatctttcacta
ccaaagcaacagggagagttattggaaaggtcaactatcactagtgtttaccagaacagt
gtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgtcacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctatacctacagtcactgcccagttacccacgatcgtggccatcgccgac
cagaacagcgttccgtgcttgcgagctctggcggccaacaagcagaccctgctgatcccc
caggtcgcctacacgtactcgactgcagtcagcccggcggcccaggaagcagccctgagg
gcggcccagcccaacggaaatcaggatgaaaggcaagacactagctccgaaggagtatcc
aatgtagaagatcagaacgactctgactccacgccacccaaaaagaaaatgcggaagaca
gaaaatggaatgtatgcttgtgatttgtgtgacaagatattccagaagagtagctcgttg
ttgagacataaatacgaacacacaggtaaaagacctcacgagtgcggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacacgcgcttgcattccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctattcccagcacatg
aaccaccgctactcctactgcaagagggaggccgaggggcccgagccgggggccgcgggc
cctgggggcccgcccacgcaccacgcgggggcccgcgcctccccctcgcagggcgactcg
gacgagagggagagctccacgcgggaggaggacgaggacagtgacaaggaggaggaggag
gaggaggaggagagggagatggaagacctgcaggaggaaaaggaaagtggaggaccgcag
gggggggaggggcgcgagggggaggggcgcgagggggaggggcgagccaactccgaagaa
ggtgcgagggagggcgcaggagctggaagcccagcccacagcttagaacacaaagtcagc
cagggcgctgagcaggtgtctgaagagaaaacaaatgaagcctga
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integrated database retrieval system
