Globicephala melas (long-finned pilot whale): 115840198
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Entry
115840198 CDS
T11080
Symbol
SIGMAR1
Name
(RefSeq) sigma non-opioid intracellular receptor 1
KO
K20719
sigma non-opioid intracellular receptor
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05014
Amyotrophic lateral sclerosis
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115840198 (SIGMAR1)
05022 Pathways of neurodegeneration - multiple diseases
115840198 (SIGMAR1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115840198 (SIGMAR1)
Transporters [BR:
gmf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
115840198 (SIGMAR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERG2_Sigma1R
Motif
Other DBs
NCBI-GeneID:
115840198
NCBI-ProteinID:
XP_030688610
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All DBs
Position
6:complement(81367547..81369642)
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AA seq
285 aa
AA seq
DB search
MVRPERRCPGALAVPIGQGEPYHGGGGGTGRRRRAKRHGGSEGHSLRPPPLSALRWARPP
SGMQWAVGRRWAWAALLLAAAAVLAQVVWHWLGTQSFVFQHEEIAQLARQYAGLDHELAF
SRLIVELRRLHPGHVLPDEELQWVFVNAGGWMGAMCLLHASLSEYVLLFGTALGSSGHSG
RYWAEISDTIISGTFHQWREGTTKSEVFYPGETVVHGPGEATAVEWGPNTWMVEYGRGVI
PSTLAFALADTIFSTQDFLTLFYTLQAYARGLRLELTTYLFGQDA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggttcgacccgagaggcggtgccccggtgccctggcagttccgattggccagggcgag
ccgtaccacggcggtggcgggggaacgggtcgtagacggcgcgccaagagacacggaggc
agtgagggtcacagccttaggcccccacctctctctgcgctgcgctgggccaggccgccc
tctgggatgcagtgggccgtgggccggcggtgggcgtgggccgcgctgctcctggcggcc
gcggctgtgctggcccaggtggtctggcactggctgggcactcagagcttcgtcttccag
catgaagagatcgcgcagctggctcggcagtacgccgggctggaccacgagctggccttc
tctcggctgatcgtggagctgcggcgcctgcacccaggccacgtgctgcccgacgaggag
ctgcagtgggtgttcgtgaacgcgggaggctggatgggcgccatgtgccttctgcacgcc
tccctgtccgagtacgtgctgctcttcggcaccgccctgggctctagcggccactcgggg
cgctattgggctgagatctcggataccatcatctctggcaccttccaccagtggagagag
ggcactaccaaaagcgaggtcttctacccaggggagacagtggtgcacgggcctggtgag
gcaacggctgtggagtgggggccaaacacatggatggtggagtacggccggggtgtcatc
ccatctaccctggccttcgcgctggctgacacaatcttcagcacccaggacttcctcacc
ctcttctatactcttcaagcctatgcccggggcctccggcttgaactcaccacctacctc
tttggccaggacgcctga
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