Globicephala melas (long-finned pilot whale): 115840295
Help
Entry
115840295 CDS
T11080
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115840295 (CHD9)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115840295 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
115840295
NCBI-ProteinID:
XP_030688833
LinkDB
All DBs
Position
19:31651736..31896659
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISSQNGSPFHQQGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQINNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLHSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMAQTQLHTQARSWHSSLSNHQHVHDRNR
LCLQRQPPSSKKSDGPGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDAEQVPQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSIKIKKHSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCERSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKDELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPK
GIILEDVKVKSENLKEEPQFSEEESVTSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSVPTPAGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQRRPLDSEDGALGQQQYLTRLRDLQGASETS
LASFPKSMPISGTPIQSTLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENTEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAATATSISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSTELEGKKER
TESQNSENGGESSVSSSPSTSSTAALSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHI
PTLSQSNTFDVQKNKNSDLGSSKSVEVKEEDSRVGDQEDKGGTEPSPLNENSTDEGSEKA
DASSGSDSTPSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatctccacactctcagttt
aactgttctccgatccaccctcagaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaagtcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattaataat
gcatctacttcacagcagtccctttcgatgcagcaattttctcaaacgtcaaatccttca
gtacacttcctgaagtgtagcaatcatcaagaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcataggggaatcaag
caagaatcgactcagcatatgctaaatcccaatacatcgctgcattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgttcac
atgaacttcccggatcctgttgactcaggaactcaaatgggccatttcaatgatcatgta
gaaactaacggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccgttcacaggacttgacccagaagacctccttcaggagggtctccttccccaattt
gatgagtcagcatttggacaagataattcaagtcatgttttagatcatgaccttgatcgg
caatttacttcacatctcgtaacacggccttctgatatggctcaaactcagttgcatact
caggctcggagttggcattcatcactttctaatcatcagcatgtacatgacagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagagtgatggtcctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgca
gagcaggtgccacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaaggctctataaaaataaaaaagcattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccgagtgaagaagatgctgcaattgtggacaaaatactatcttct
agaattataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttgcaagcttcacggcctgacacaagacatttggac
cgtcctccttctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaactggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcgaatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gagcacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctggaacccttaaggtttccttctgaatcaacgttcatgcaagaattt
ggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatg
ttgagacgattgaaagaagacgtggaaaagaagttggcacctaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattctggagaagaacttt
tcatttttatccaaaggagcagggcagactaatgtacccaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcacccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctt
atacataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacc
cgagctggtggtttgggcatcaacttaactgcagctgatacatgtataatttttgattct
gattggaatcctcaaaacgaccttcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgaaagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtattacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagat
attgatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtggg
tcaacatttgccaaggcaagttttgtggcatctggaaatcgaacagatatttccttagat
gatcccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagatgccatcagt
ggtagaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagt
gctacaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagta
gagaaaaatctgctagtttatgggtggggccgatggagagagattctgtctcatggccgt
tttaaaaggcagctaaatgagcacgatgtggaaataatttgcagagccctcttagcttat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaaccgaagatgggcagacacgagagctacaaaatcatctaggtctgtcagcccctgta
cccagaggtcgaaaagggaagaaagtaaagactcagacaagctcatttgatatacaaaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaaggctacaaaaaa
catataaaacaccactgtaataaagttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaatgagtgccagaaagtgtttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccggcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtt
gctgcagaacagagggcgaacgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatctt
gttatagcagatggagatggtcagctgatggagggtgataaaatttattggcctactcag
tcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacaacctactttctcagtgcctgccagtgttatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagttgtatctacatttggagtggtgtttgat
cctgacagaggccaatttgattggacaaaatttagagctatggctaggctacataagaaa
actgatgatagtttggagaaatatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagatgaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttatatcgcattgaacttctaaggaaagtaagggaacaggcc
ctccgacatccacagttgtttgagcgcttgaagctttgccatccaaatccagacttacca
gtctggtgggagtgtggccctcatgatagggacttgctcattggagctgctaaacacggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaa
ggtattattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagttt
tctgaagaagaatctgtgacttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagagcctctaactccaaacccagcttct
aagaagcagcgagtccacaaaagaggatcagagtctagttctgattctgactctgattct
gagagatcgtcctgttcttccagatcatcttcttcttcgtcttcctcttcttcttgttcc
cactctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttca
tcctcatcctcgtcctcctcttcctcatcctcctcctcatcttcatcagaagaaagtgac
agtgaagaagaggaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaagaaagcgttgcatcactgagcactacccaggatgagacccaggatagtttccagatg
aacaacgggaccccagagtctgcttacatcctgcaaggtggatacatgctggcagcttcg
tactggccaaaggaccgtgtgatgatcaaccggttggacagtatttgtcaaacagtcctg
aaagggaagtggccttcagctagaagaagttatgatgccaatgcagtggcttctttctat
accacaaagctgctggacagctctggcgcagctacagaatatagtgagcccagcgtgccc
actcctgcaggtgctggcgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagagaaggccattggacagtgaagatggtgct
ctagggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtcagagaccagc
ctcgccagttttccaaaatccatgccaatatcaggtactcccattcaatcaacccttggt
gccaatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaag
aatgtagaaggtgttgacatcctctttttcaacagaaataaaccacctaatcatgttact
ttaggcttaaccacctcacagatttctacagggataaatccagcactatcctatactcaa
cctcaaggaattcctgatacagaaagtcccgttccagttattaatcttaaagatgggaca
agacttgcaggcgatgatgcaccgaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagaatgcagctccatgaggggaga
cccaagcaaaaaaggcatcgttgcagaaatcccaataaactagatgtgaatagtctcact
ggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgccttt
gctccccctctgaaagatttatgtcggttcctgaaagaaaatacagaatatggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgaacgt
attctcactggtcccgttgtgagagaggaagtaagcaggcgagggagacggcctaaaagt
ggaattgcaaaggccactgcggcagcagcagctgcaactgccaccagtatttcaggcaat
cctttattagccaatggattacttccaggtgtggacctcacaactcttcaggccttacaa
caaaacctacaaaacttgcagtcactgcaagtaactgcagggctgatgggaatgcctgct
ggcctttcttctggaggagaagctaaaaacgtggctgccatgttccccatgctgctgtca
ggaatgactggattgccaaatctgttgggcatgggaggactcctgacaaagcctacagaa
tctggaacagaagaaaaaaagggaaatgactctacggagctagaaggaaaaaaagaaagg
acagagagccaaaattcagagaatggtggtgaaagctctgtgtcaagttctccttcaaca
tcctctactgctgcattaagtgcagctgcagctgccaacccgttagctcttaacccacta
ttactatctaatatactttatccagggatgcttctcactccaggccttaatcttcatatt
ccaactttgtcccagtccaatacttttgatgtacagaaaaataaaaacagtgacttaggc
tcatctaagtctgtagaagtaaaggaagaagattccagagttggagatcaggaagacaaa
gggggaactgaaccgagtcctctcaatgaaaacagcacagatgagggttcagagaaagct
gatgcttcatctggatctgatagtacaccatcgtcatctgaggattcagattctagtaat
gaagactga
DBGET
integrated database retrieval system
