Globicephala melas (long-finned pilot whale): 115840317
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Entry
115840317 CDS
T11080
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04115
p53 signaling pathway
gmf04120
Ubiquitin mediated proteolysis
gmf04137
Mitophagy - animal
gmf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115840317 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115840317 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115840317 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
115840317 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115840317 (SIAH1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115840317 (SIAH1)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
115840317 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
115840317
NCBI-ProteinID:
XP_030688909
LinkDB
All DBs
Position
19:complement(27549840..27574419)
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AA seq
313 aa
AA seq
DB search
MTGKPPLPFLYSWRGVLLTCLPASGTKKRKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggaagcctcccttaccttttctgtactcctggaggggcgtcttgcttacttgt
ttaccagcatctgggacaaagaagagaaaagaaatgagccgtcagactgcaacagcatta
cctactggaacctcaaagtgtacaccatcccagagggtacctgccctgactggcacaact
gcgtccaacaatgacttggcgagtctttttgagtgtccggtctgctttgactatgtgtta
ccacccattcttcagtgtcagagtggccatcttgtttgtagcaactgtcgcccaaagctc
acgtgttgtccaacatgccggggcccgttgggatccattcgcaacttggctatggagaag
gtggccaattcagtacttttcccttgtaaatatgcctcttctggatgtgaaataactctg
ccacacacagaaaaagcagaccacgaagagctctgtgagtttaggccttattcctgtccg
tgccctggtgcttcctgtaaatggcaaggctctttggatgctgtaatgccgcatctgatg
catcagcataagtctattacaaccctacagggagaggatatagttttccttgctacagac
attaatcttcctggtgctgttgactgggtgatgatgcagtcctgttttggctttcacttc
atgttagtcttggagaaacaggaaaaatacgatggtcaccagcaattctttgcaattgta
cagctgataggaacacgcaagcaagctgaaaattttgcttatcgacttgagctaaatggt
cataggcggcgattgacttgggaagccactcctcgatctattcatgagggaattgcaaca
gccattatgaatagtgactgcctagtctttgacaccagcattgcacagctttttgcagaa
aatggcaatttaggcatcaatgtaactatttccatgtgttga
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integrated database retrieval system
