Globicephala melas (long-finned pilot whale): 115840325
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Entry
115840325 CDS
T11080
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115840325 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115840325 (VPS35)
Membrane trafficking [BR:
gmf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
115840325 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
CENP-O
Motif
Other DBs
NCBI-GeneID:
115840325
NCBI-ProteinID:
XP_030688930
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Position
19:complement(26008339..26052905)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcttggatgaagccata
caggctgtgaaggtccagtcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgaacttcggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactacttggaagtttac
ctgacagatgagtttgctaaaggaagaaaagtggcagatctctatgaacttgtacagtat
gctggaaacattatcccaaggctttatctgttgatcacagttggagttgtatatgtcaag
tcatttcctcaatccaggaaagatattttgaaagatttggtagaaatgtgccgaggtgtg
cagcaccctttgagaggcctgtttcttcgaaattatctacttcagtgtaccagaaacatc
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtactactcaactttgcagaaatgaacaagctctgggttcgaatgcagcatcag
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactaaggattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttataaacag
attgttttgactggcatattggagcaagttgtgaattgcagggatgctttggctcaagaa
tatctcatggagtgtattattcaggttttccctgacgaattccaccttcaaactttgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctggaattccaaca
gatattaaactttttgacatattttcacagcaggtggctacagtaatacagtcgagacaa
gacatgccttcggaggacgttgtatctttacaagtctctctcattaatctcgctatgaag
tgttatcctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattt
aataagctcaacctcgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttctgaagatacctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
tttcacccactctttgagtactttgactatgaatccagaaaaagcatgagttgctatgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatcaacgttgattcaggatcagccagatcaacctgtagaagaccctgac
ccagaggactttgctgatgagcagagccttgtgggcagattcattcatcttctacggtct
gaggaccctgatcagcagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcagcggattcgcttcacactgccacctttggtatttgcagcttaccagctggct
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactatcagtgctttgatcaaagcagagctggcagaattaccc
ttaagactttttcttcagggcgctctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctttgtatgaagatgaaatcagtgat
tccaaagcacagctggctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagaaaatcatgaacccttgaggactcagtgtgctcttgctgcatccaaactt
ctgaagaaacctgatcagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacaaaaatggggaggagcttcacggaggcaagagggtaatggaatgccta
aagaaagctctaaaaatagcaaatcagtgcatggacccctctttacaagtgcaacttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcacgatt
caggttttgaatcagcttatccaaaagattcgagaagacctcccaaatcttgagtccagt
gaagaaacagagcagattaacaaacattttcataacacactggagcatttgcgcttgagg
cgggaatcaccggaatctgaggggccaatttacgagggtctcatcctttag
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