Globicephala melas (long-finned pilot whale): 115840523
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Entry
115840523 CDS
T11080
Symbol
AP5B1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmf03400
]
115840523 (AP5B1)
DNA repair and recombination proteins [BR:
gmf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
115840523 (AP5B1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
115840523
NCBI-ProteinID:
XP_030689434
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Position
8:6718707..6724961
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AA seq
877 aa
AA seq
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MGPTSRETWAQRLGTFRASPSAFMAGPEGEDLGRHLLSDLRSEKLSEPTKVSLLALSLEY
PAQLWPDAPAAEVAATSLLDTLVLLPPRPSALRRPLLLAATTALAAGGALGPTSRASRRL
LPLLLGLASGHDLGRSFGPASEQRPLQATAWECLRELESCKPGLLGGCLGLLRGLLGQEA
AVQPLSLLLALALRNALVIQARARAGLQGLLVAGGCPTEGGPWNWMLVEEGDAHLQPQAP
SWPAAEEGECCLAMLELSPEEARELRAAVAQLLDISYLLTPVAQAQLLWLLGWALRGLRG
QPPVLFKPQLVRLLGTAQLTLLHAVLALKAAFGEALFTAQDEALLLRRLTLAAQHPALPL
PAHLFYLHCLLNFPENWPLGPAGEEAAPLLLGFQLCRGLLPSLLHDPMALLARLHLLCLL
CVEDEEKEEKGQDQSPRQYLEELLAGLRQRAALDGGPRALATLCFQASYLVARCLAGQPV
VLTPLTHGLAQLYRARPALAPHFVDLLDRVGPELGEPLKVVLRQEVVSRPGRDEALRWHL
QMLARVADGDAQSATLGFLQAAAARCTDWGLQQALLQVCRALLRAGVGGGLADLLQALAR
QLEDPDGRDHARLYYILLAHLEEPKLGVALGPSLAAPALASSLVAENQGFAAALMVQEAP
APIRLSMGPHRAKGPVPVLQLQVEVLEQVYSLELRFRVERQLYAPLGAVHVPCLCPGHPT
RPLLLPLQPRRPAPARLAVRALYTTPSGLTCHAHLPPLLVNFADLFLPFPQPPEGAKLGF
FEELWDSCLPKGTESRLWCPLGPHGLEALVSRHLEPFVVVAQPPTSYLIAIRLPPDSRLL
LRLEAAQADGVPVALRTDDWALLPLVGDYLRGLSAAG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggacccacgagccgggaaacctgggcccagcgcctgggcaccttccgggccagcccg
tccgccttcatggcaggtcctgagggtgaggatctgggtcgtcacctgctgagcgacctg
aggagtgagaagctgagcgagccaactaaggtttccttgctggctctgagcttggagtac
ccagcgcagctgtggccggacgctcctgcggccgaagtagccgccacctccttgttggat
accctggtccttctacccccgcggccctcggctctgcggcggccccttctgctggcggcc
accacagccttggcggcaggaggtgcgttgggccccacctcgagagcctcccgccggctc
ttgcccctgctgctgggcttggcctcgggccacgatttggggagaagcttcggtcctgcc
tcggaacagcggcccctgcaggccacagcgtgggagtgcctgcgggagctggagagctgc
aagcctgggctgctggggggctgtctggggctgcttcggggcctgctggggcaggaggcc
gctgtacagccactcagcctgctgctggcacttgccctacgaaacgccttggtgatacag
gccagggccagggctggcctgcagggcctgctcgtggctgggggctgtcccaccgagggt
ggtccctggaactggatgctagttgaggagggtgatgcccaccttcagccccaggcaccc
agttggccagcagctgaggagggggagtgttgccttgccatgctggagctcagtcctgag
gaggcccgggagctgcgggctgccgtggcccagcttctggacatctcctacctgctcact
cctgtggcccaggcccagcttctgtggctgctgggctgggccctgcggggtcttcgggga
cagccaccagtgctcttcaagccacagctggtacggctgctgggcacagcacagctgacg
ctgctgcacgccgtcctggctctgaaggcggccttcggtgaggcactgttcacagcccag
gatgaggccttgctgcttcgccggctcaccttggctgcccagcacccggccctgcccctg
cccgcccatctcttctacctgcactgcctcttgaacttccctgagaactggccgctgggc
cccgcaggcgaggaggctgccccgctattgctggggttccagctatgccgtggcctcctg
cccagtctcctgcatgacccgatggccctgctggcccgcctgcatctgctgtgcctcctc
tgtgtggaagacgaagaaaaggaggaaaagggccaggatcagagcccccggcagtacctg
gaggagctactggctggcctgcggcagagggcagccctggatggtggcccccgggcctta
gccactctctgcttccaggcctcctacctcgttgctcgctgcctggccgggcaacctgtg
gtgctgacacccttgacccacggactggcccagctgtaccgagcccggcctgcactggct
ccccatttcgtggatctcttggatcgggtgggccctgagctgggggaacccttaaaggtg
gtcttgcggcaggaggtggtgtccaggccaggcagggatgaggcccttcgttggcacctg
cagatgctggcaagggtggcagatggggatgcccagagtgccacccttggcttcctgcag
gctgcagctgctcgctgcacggactggggcctccagcaggccctcctacaggtctgccgg
gccctgctgcgggcaggtgttggaggaggcctggcggacttgctgcaggccctggccagg
cagctggaggaccctgatgggcgggaccacgcgcgcctctactacatcctcctggcccac
ctggaagagcccaagctgggggtggccctgggcccctcccttgccgcacctgcactggcc
tcttcactggtggccgagaaccagggctttgctgcagcgctgatggtgcaggaggccccg
gccccgattcggctaagcatgggtccccacagagccaagggcccggtcccagtgctgcag
ctccaggtggaggtgctggagcaggtgtattctctggaactgcgcttccgtgtggaaaga
cagctctatgcacccttgggggctgtgcacgtgccgtgcctgtgccccggccaccccacc
cgccctctgctgctgcctctgcagccccgacgcccggctcccgcgaggctggctgtgcgc
gccctgtacaccacacccagcggcctcacctgccatgctcacctgccacccctgcttgtg
aacttcgctgacctctttctgcctttcccccagccccccgagggggccaagctgggcttc
ttcgaggagctctgggactcctgcctgccaaagggcaccgagagtcgcctgtggtgccct
ctagggccacatgggctggaggccttggtgtcccgccacctggagccctttgtggtggtg
gcccaacccccgaccagctaccttatagccatccgtctgcccccagactcgcggttgctg
ctgcggctggaagcagcccaggcagacggagtgcctgtggccctgcggactgatgactgg
gccctgctgcctctggtgggggactacctccgggggctgtcagcggctggctga
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