Globicephala melas (long-finned pilot whale): 115840577
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Entry
115840577 CDS
T11080
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X3
KO
K13095
splicing factor 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115840577 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmf03041
]
115840577 (SF1)
Spliceosome [BR:
gmf03041
]
Complex A
Other components
Complex A specific factors
115840577 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
115840577
NCBI-ProteinID:
XP_030689582
LinkDB
All DBs
Position
8:7492486..7506334
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AA seq
665 aa
AA seq
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MATGANATPLGKLGLPGPKGGFEPGPPPAPGPGTGLLVSGPPPPPPVGSVGALTAAFPFA
ALPPPPPPPPPPPPPPPQQPPPPSPGSSYPSPQPPPPPPLYQRVSPPQPPPQPPRQDQQP
GPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTR
KLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDF
KPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSV
KEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQ
LRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSA
QDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPASNPPPPSLMSTAQ
SRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPP
WMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPP
PPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMARAMRVRT
FRAHW
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctgggtaagctgggcctccctggccccaaaggg
ggcttcgagccggggccaccgcctgcccccgggcctgggacggggctgctggtgtccggg
ccgccgccgcccccgcccgtgggctcggtgggggccctgaccgcggccttccccttcgcg
gcgctgccgccgccgcccccgccgcccccgccgccgccccccccgcctccccagcagccg
ccgccgccctccccgggctcctcgtacccgtcgccgcagccgccccctccgccgccgctc
taccagcgcgtgtcgccaccgcagccgccaccccagccgccgcgtcaggaccagcagccg
ggcccggccggtggcggaggagactttcccagtaagaagcggaagaggagccgctggaac
caagacacaatggaacagaagacggtgattccaggaatgcctacagttatcccccctgga
cttactcgggaacaagaaagagcttatatagtgcaactgcagatagaagacctgactcgt
aaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtccccttcccct
gagcccatctacaatagcgaggggaagcggcttaacactcgcgagttccgcacccgcaaa
aagcttgaagaggagcggcataacctcatcacggaaatggttgccctcaaccctgatttc
aagccacctgcagattacaaacctccagcaacacgtgtgagcgataaagtaatgattcca
caagatgagtatccagaaatcaactttgtggggctgctgattgggcccagagggaacacc
ttgaagaacatagagaaggagtgtaatgccaagatcatgatccgggggaaaggctctgtg
aaagaagggaaagtcgggcgcaaagatggccagatgctgccaggagaagatgagccgctt
catgccctggttactgccaataccatggagaatgtgaagaaagcagtagaacagataaga
aacattctgaagcagggtatcgagactcctgaggaccagaacgatctacggaagatgcag
cttcgagagttggctcgtttgaatgggacccttcgggaagatgataacaggatcttaaga
ccctggcagagctcggagacccgcagcattaccaataccacagtgtgtaccaagtgtgga
ggggctggccacattgcttccgattgcaaattccaaaggcctggtgacccccagtcagct
caggataaagcgcggatggataaagaatacttgtccctcatggccgaactgggggaggca
cctgtgcccgcatctgtgggctccacctctgggcctgccaccacacccctggccagtgca
cctcggcccgctgctcccgccagcaatccacctccaccgtctctcatgtccactgcccag
agccgcccaccctggatgaattctggcccgtcagagagtcggccctaccatggcatgcac
ggaggtggccctggtgggcccggaggtggcccgcacagcttcccacacccgttacccagc
ctgacgggcgggcacggtggacaccccatgcagcacaacccgaatggaccccctcctcct
tggatgcagccgccgccaccaccgatgaaccagggcccccacccacctgggcaccatggc
cctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtctatcgcctg
catcaaggaaaaggtatgatgccgccaccacctatgggcatgatgccgccgccgccgccg
cctcccagtgggcagcctccaccccctccctctggtcctcttcccccatggcagcagcag
cagcagcagcctccaccgccccctccgcccagcagcagtatggcttccagtacccctttg
ccatggcagcaaagatccctccccgcggcggcgatggcccgagccatgagagtgaggact
ttccgcgcccattggtga
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