Globicephala melas (long-finned pilot whale): 115840620
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Entry
115840620 CDS
T11080
Symbol
TAF6L
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115840620 (TAF6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115840620 (TAF6L)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115840620 (TAF6L)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115840620 (TAF6L)
Coactivators
SAGA/TFTC/STAGA complex
115840620 (TAF6L)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115840620 (TAF6L)
STAGA complex
115840620 (TAF6L)
TFTC complex
115840620 (TAF6L)
SAGA complex
115840620 (TAF6L)
SLIK complex
115840620 (TAF6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
115840620
NCBI-ProteinID:
XP_030689704
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All DBs
Position
8:complement(8937026..8948885)
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AA seq
626 aa
AA seq
DB search
MQSSIGAMSEREERRFVEIPRESVRLMAESTGLELSDEVTALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNKGGPGSRGCRRSDDLPWDSLLLQESPSGGSAEP
GFGSGLPLPPGGAGPEAPSPSVTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKK
EPAAAPDSVRKMPQLTANAMVSPQGDESPRGGGPPSASAPTASESRPLPRVHRARGAPRQ
QGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQ
KLPMIGRTGRPARRWALSDYSLYLPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagttccatcggggccatgtcggagcgagaagagcggcggttcgtggagatccct
cgggagtccgtccggctcatggcagagagcacaggcctggagctgagtgatgaggtgacg
gccctgctcgcagaggacgtgtgctaccgtctcagagaggccacccagaatagctctcaa
ttcatgaaacataccaaacggcggaagctgactgtcgaggatttcaacagggccctcaga
tggagcagtgtggaggctgtgtgtggttatgggtcccaggaggcgctgcccctgcgccct
gccagggagggtgagctctacttccccgaggaccgagaggtgaacctggtggagctggcc
ctggccaccaacatccccaaaggctgcgccgagacagctgtgagagttcatgtctcctac
ctagatggcaaagggaacctggcccctcaaggatcggtgcccagtgctgtgtcttcactg
actgatgaccttctcaagtactaccagcaagtgactcgggctgtgctgggggatgatcca
cagctgatgaaggttgccctccaggacttgcagaccaactcgaagattgcagcgctcctg
ccgtactttgtttatgtggtcagtggggtgaaatctgtaagccacgacctggagcagcta
caccggctcttgcaagtggcacggagcctagttcggaacccacacctctgcctggggccc
tatgtccgctccctggtaggcagtgtcctctactgtgtcctggagcccctggctgcctcc
atcaacccgctgaatgaccactggaccctgcgggatggagctgccctcctgctcagtcac
atcttctggactcatggggaccttgtaagtggcctctatcagcagatcctgctctccctg
cagaaggtcttggcagatcctgtgaggcctctctgctctcactacggggctgtggtgggg
ctgcacgcccttggctggaaggcagtagagcgagtcctgtacccacacctgtccacttac
tggacaaatttgcaggctgtgctagatgattattcagtatcgaatgcccaggttaaagca
gatgggcacaaagtctatggagccattctggtggccgtagaacgactgctgaagatgaag
gcccaggcagcagagcccaacaagggtgggccaggcagcaggggctgccggcgctcagac
gacctgccttgggacagtcttctcctgcaggagtctccctccgggggcagcgcagagcca
ggctttgggtctggtctcccgctgccgccaggaggcgcggggccggaggctccttcccct
tcggtgaccctggcggacatctatcgggagctctacgccttcttcggtgacagcttggcc
acccgctttggcacgggtcagcccgcgcccacggccccgcggccgcctggggacaagaag
gagccggcggccgccccggactcggtgcggaagatgccgcagctgaccgccaacgccatg
gtcagcccgcagggcgacgagagcccccggggcggaggccccccgtcggcctctgccccc
accgcctctgagagcaggccgctgccgcgcgtgcaccgggcgcggggggcgccccggcag
cagggcccgggcgccggtacccgcgacgtcttccagaagagccgtttcgccccgcgcggt
gcccctcacttccgtttcatcatcgccgggcggcaagcagggaggcgatgccgcgggcgc
ctcttccagactgccttccccgcgccgtacgggcccagcccggcctcccgttacgtgcag
aagctgcccatgatcggccgcaccggccgcccggcccgccgctgggcgctctcggactac
tcgctgtacctgccgctttga
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