KEGG   Globicephala melas (long-finned pilot whale): 115840809
Entry
115840809         CDS       T11080                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmf03019]
    115840809 (LARP1)
Messenger RNA biogenesis [BR:gmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115840809 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 115840809
NCBI-ProteinID: XP_030690067
LinkDB
Position
3:130091008..130145996
AA seq 1101 aa
MATQVEPLLPGGAPLLQAEEHGGLVRKKPPPSSEGKGEPGANDVGGGEPDGGARRPRPPC
AKPHKEGTGQLERESPRPPQPPGAEGPAVSDGEEGGGGEPAAGGGAAGAVGAGRRDFVEA
PPPKVNPWTKNALPPVLATVNGQSPPEHAAPARVVRAAVPKQRKGSKVGDFGDAINWPTP
GEIAHKSVQPQSHKSQPARKLPPKKDMKEQEKGEGSDSKESPKTKSDESGEEKNGDEDYQ
RGGQKKKGNKHKWVPLQIDMKPEVPREKLVSRPTRPPEPRHTPANRGEIKGSEPATYVPV
PVAPPTPAWQPETKSEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRGGTRT
HFDYQFGYRKFDGAEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSV
DNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDEKVRRR
EEPEKWPLPGPPIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTPVPTKTEEV
SNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEEPRFLHPTTLPQQLPSQQLM
SKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEDSDYEIDDRDVNKILIVTQTPPYMRR
HPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWTEKFEPEYSQIKQEVENFKKVNMI
SREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGAPEPSTIARSLPTTVPESP
NYRNARTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWV
MDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRR
RCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLF
RYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYL
GKFRRLEDFRVDPPMGEEGNHKRHPVAAGGGSGEGRRRCPSQSSGRPSAVVGQPPTPATG
QPIREDAKWTSQHSDAQTLGK
NT seq 3306 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagccgctgctgccggggggcgccccactcttgcaggccgaagag
cacggggggttggtgaggaagaagccgccgccgtcgtccgagggcaagggcgagcccggg
gcgaacgacgtcggagggggggagccggacggcggcgcccggagacctcggccgccctgc
gccaagccacacaaggagggcacagggcagctggagcgcgagagcccgcggccgccgcag
ccgcctggcgccgagggcccggccgtcagcgacggggaggagggcggcggcggcgagccg
gccgctggcggaggagctgccggagccgtgggcgccgggcgccgagacttcgtggaggcc
cctccgcccaaggtgaacccgtggactaagaacgcgttgccgccggtcctggccaccgtg
aacggacagtctcctccagaacatgctgctccggccagggtggtgagggcagcagttcct
aaacagcgcaaaggtagcaaggttggtgactttggagatgcaatcaactggccaacacct
ggagagatagcccacaagagtgtgcagccacagtcccacaagtctcagcctgcccgcaag
ctgccacccaaaaaagacatgaaggaacaggagaaaggagaggggagtgatagtaaggag
agcccgaaaaccaaatcagatgaatcgggggaggagaagaacggggatgaggactaccag
cgaggcgggcagaagaagaaagggaacaaacacaagtgggttccgttgcaaatagacatg
aagcctgaagtgcccagggagaaactggtctctcgccctactcgcccgccagagccacga
cacacacctgccaaccgcggggagatcaaagggtctgagcctgccacctacgtgcccgtg
cccgtggccccccccaccccagcctggcaaccagagaccaaatcggagcctgcctggcac
gaccaggatgagacatcgagtgtgaagagtgatggggctggtggggcgcgggcttccttc
cgtggccgtggacgggggcgtggtcgcggccggggacgcggccggggtggcactcgaacc
cattttgactaccagttcggctaccgaaagtttgacggtgcagaggggccgcgcaccccc
aagtacatgaacaacatcacctactactttgacaatgtcagcagcactgagctttacagc
gtggaccaggagctgcttaaagactacatcaaacgccagattgaatactacttcagcgtg
gacaatttagagcgagacttcttcctgcgacggaaaatggatgctgacggtttccttccc
atcacacttattgcgtccttccaccgagtacaggcccttaccactgacatttcactcatt
tttgcggccctaaaggacagcaaggtggtggagatcgttgatgaaaaagtccgccgaagg
gaggagccagagaaatggcctcttcctggtcccccaatagtggattattcccagactgat
ttctcccagcttctcaactgcccagagtttgtgccccgccagcactatcagaaggagaca
gagtcggcgcctggctctccccgtgctgtcacaccagtgccaactaaaacagaggaggtc
agcaacctaaagaccctgcccaagggcctgtctgccagcctccctgacctggattctgag
aactggattgaagtgaagaaaagacctcggccctccccagcacgacccaagaagtcagag
gagccccggttcctccacccgactactctgcctcagcagctgccctctcagcagctgatg
tccaaggatcaagacgagcaagaggaactggatttcctgtttgacgaggaaatggagcag
atggatgggcggaagaacacctttaccgcctggtctgatgaggactctgactatgagatt
gatgaccgggatgtcaacaagatcctcattgtcacccagacgccaccttacatgcgccgg
cacccggggggggaccgcacaggcaaccacacctcgcgtgccaagatgagcgctgagctg
gccaaggtcattaacgatgggctcttctactacgagcaggacctgtggactgagaagttt
gaacccgagtattcccagatcaagcaagaagtcgagaacttcaagaaagtcaacatgatc
agtcgggagcagtttgacacactaacccctgagccccctgtggatcccaaccaagaggtc
cctcctggaccacctcgcttccagcaagttcccactgacgccctggccaacaagctgttt
ggtgcccctgagccctccaccattgcccgctctctaccaaccactgtcccagagtcgcca
aactatcgcaacgccaggacccctcgcactccccggacaccgcagctcaaagactcaagc
cagacgtcacggttttatccagtggtgaaggaaggtcggacgctagatgctaagatgcct
cggaaaaggaagaccagacacagctcaaacccacccttggagagtcacgtgggctgggtg
atggattcccgcgagcacaggccccggactgcttccataagctccagcccctcagaaggc
acgcctgcggttggcagctatggctgtacccctcaatcgctgcccaagttccagcatcct
tcccacgagctgctcaaggaaaacggcttcacacaacacgtctaccacaagtatcgtagg
cgctgccttaacgagcggaaacgcttgggcattggccagtctcaggagatgaacactctc
ttccgcttctggtccttcttcctccgagatcacttcaacaaaaagatgtatgaggagttc
aagcagctggctctggaggatgccaaagaaggctacagatatggtttggagtgccttttt
cgatactacagttatggcctggaaaagaagttccggctggacatatttaaggactttcag
gaggaaaccgtgaaggactatgaagctggtcagctgtatgggctggagaagttctgggcc
ttcttgaaatattccaaagccaaaaatttggacattgaccccaaacttcaagaatacctc
ggcaaattccgacgtcttgaagacttccgagtggatccccccatgggtgaggagggcaac
cacaagcgacacccagtggcagcaggaggtggcagcggtgagggcaggaggcggtgcccc
tcccagtcttccggcaggccctccgccgtggtcggccaaccccccacaccagctaccggc
cagcccatccgagaagacgctaaatggacaagccagcactcggacgcacagactttggga
aagtga

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