Globicephala melas (long-finned pilot whale): 115840829
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Entry
115840829 CDS
T11080
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X2
KO
K09271
transcription factor SOX15/30
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115840829 (SOX30)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115840829 (SOX30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
115840829
NCBI-ProteinID:
XP_030690114
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Position
3:complement(132755489..132789186)
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AA seq
771 aa
AA seq
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MERARPEPPPQPRQLPRATPPRPLRPAPPPVAVEGAFFRAAAAEPSASPLAPCAAAIVTL
ASSCGEAPASGVQPAARRVLQVNPEQVLLLPPGPPLLQAREEGAAASPAQARLLQLRPEL
LLLPPPPPPPPPEGSPCRPQLHLGQPLPVHVKAEKQELDPSLDPSVGPRRAVKAGPKASK
AAKAGGSGPAIDSPRGDEKGKMEEEEEVMSYTAAKGGEGKSLAAISEGVIKTEEPERLRE
DSRLGTEPASSGLVHGSKDVILTQPSIAFGPHQQDLRIPLTLPTVPPGARIQFQGPPPSE
LIGLTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMN
AFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFP
GWIYQPRPGKRKRFPLSVSNVLSGTTQNIISTNSTTVYPYCSPTYSVVIPSLQNPITHSV
DEAPPAIPLPTPAVQRPSPITVFQPSISSTAQVAVQAPSLPLCPPLLPQCFAGPSETDTH
QLHSGASHSVKRPTPVFLESTSRIPTSASTAHARFAASTIQPPEEYPSISTCPRSAPIPQ
APPIPHSHVCQPPPLGHAATLFGTPPRFAFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFP
SAVPECLGYYEDRCQNHEAMFSALNRDYPYGDYPDERAHSEDFWSCESMDGTSYCNSHSH
SGEEYLNLVPQLDTGALESVFTTPTSTPSNIQQVNVTDSDDEEEEKVLKNL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctgcgccccgctccgcccccggtggctgtcgagggcgccttctttcgggca
gcggccgcggagccctctgcgtcgccgctcgccccgtgcgcggccgccattgtgacgtta
gcctcgtcgtgcggggaggctccggcgtcgggcgtacagcccgcggcacggcgggtactg
caggtgaacccggagcaggtgttactgctgccgcctgggccaccactgcttcaggcccgg
gaggaaggcgcagccgcctctcccgcgcaggcgcggctgctgcagctgaggcccgagctg
ctactgctgccgccgccgccgccgccgccgccgcccgagggctccccctgcaggcctcag
ttgcacctggggcagcccctgccggtgcacgttaaggcagagaagcaggagctggacccc
agcttggatccgtcagtgggacctcggagggccgtcaaggcgggccctaaggcctccaag
gcggcgaaggcaggaggctccgggccggccatcgacagcccccgaggggacgagaagggc
aagatggaggaagaggaggaggtcatgagctacacggcggcgaaaggaggggaaggcaaa
agcctggcggctatcagcgaaggagtcatcaaaacggaggagcctgagagactccgcgag
gactccaggctcggcacagagcccgcgtccagtggcctggtccatggcagcaaggatgtc
atcctgacccagccgtccattgcctttgggccgcaccagcaagacctcaggatccctttg
actcttcctaccgtgccccctggagcccggatccagtttcagggacctccaccttcagag
ctgataggattgaccaaggtccccttgacaccagtgcctattaaaatgcagtccttactg
gagccttctgtaaaaattgaaaccaaagatgtcccactcaccgtgcttccctcagatgca
ggaataccagacactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaat
gcatttatggtttgggcaaggatccaccggccagcactagccaaagctaacccagcagcc
aacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaa
aagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcct
ggttggatttatcagcctcgtccagggaagcgaaaacgcttccctctaagcgtttccaat
gtactttctggtaccacacagaatatcatctctacaaattcaacaacagtttatccttat
tgctcacctacctactctgtggtaattcccagcctacagaaccccatcactcattcagtt
gatgaagctccacctgccatcccgctgcccacacctgcagtccagcgcccaagccccatc
acagttttccagccaagcatctccagtactgcccaggtggctgtccaggctccaagtttg
cccctctgtccaccactcctaccccagtgctttgctgggccctccgaaacggacactcat
cagctgcattctggagccagtcactctgtgaagagacccactcctgtctttctggagagc
accagcaggattccaactagtgcaagtactgcccacgccagatttgcagcctctaccatc
cagcctcccgaggagtatcccagcatctccacttgtcccagaagtgctccaatcccccaa
gctcctcctattccacactcacatgtctgccagccccctccccttggccatgcagccaca
ttatttgggacgccaccgcgattcgcttttcatcacccttacttcctacctggacctcac
tacttcccatcaagcacgtgcccttatagtcggcctccttttggctatggaaattttcca
agtgcagtgccagaatgccttggttattatgaagacagatgccagaaccatgaggctatg
ttttcagctttaaatagagactatccttatggagactacccagatgaacgtgctcacagc
gaagatttttggagttgtgagagcatggatgggacctcttactgtaacagccatagccac
agtggggaagaatacttaaatctcgtgcctcagctggacactggagccttggaaagtgtc
ttcacaaccccgacatcaactccctctaacatccagcaagtcaatgtcactgacagtgat
gatgaggaagaagaaaaagtgctcaagaatttataa
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