Globicephala melas (long-finned pilot whale): 115840881
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Entry
115840881 CDS
T11080
Symbol
PSMC2
Name
(RefSeq) 26S proteasome regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03050
Proteasome
gmf05010
Alzheimer disease
gmf05012
Parkinson disease
gmf05014
Amyotrophic lateral sclerosis
gmf05016
Huntington disease
gmf05017
Spinocerebellar ataxia
gmf05020
Prion disease
gmf05022
Pathways of neurodegeneration - multiple diseases
gmf05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
115840881 (PSMC2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
115840881 (PSMC2)
09164 Neurodegenerative disease
05010 Alzheimer disease
115840881 (PSMC2)
05012 Parkinson disease
115840881 (PSMC2)
05014 Amyotrophic lateral sclerosis
115840881 (PSMC2)
05016 Huntington disease
115840881 (PSMC2)
05017 Spinocerebellar ataxia
115840881 (PSMC2)
05020 Prion disease
115840881 (PSMC2)
05022 Pathways of neurodegeneration - multiple diseases
115840881 (PSMC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gmf03051
]
115840881 (PSMC2)
Proteasome [BR:
gmf03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
115840881 (PSMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_14
RuvB_N
AAA_28
AAA_7
Prot_ATP_ID_OB_C
AAA_33
AAA_18
TIP49
RNA_helicase
Mg_chelatase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
115840881
NCBI-ProteinID:
XP_030690189
LinkDB
All DBs
Position
9:85678067..85694175
Genome browser
AA seq
433 aa
AA seq
DB search
MPDYLGADQRKTKEEEKEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacctcggtgcagatcagcggaaaaccaaagaagaggagaaagaagacaag
cccatccgagctctggatgagggggatattgccttgctgaaaacttatggtcagagcact
tactctaggcaaatcaaacaggttgaagatgacattcaacaacttctcaagaaaattaat
gagctcacgggtattaaagagtctgacactggcctggccccaccagcactctgggatttg
gctgcggataagcaaacactccagagtgaacagcctttgcaggttgcgagatgcacaaag
ataatcaatgctgattcggaggacccgaagtacatcatcaatgtgaagcagtttgccaag
tttgtggtggacctcagtgatcaggttgcacctactgacattgaagaagggatgagagtt
ggtgtggacagaaataagtatcagattcacattccactgcctcctaagattgacccaaca
gttaccatgatgcaggtggaggaaaaacctgatgttacatatagtgatgtgggtggctgt
aaggaacagattgagaaacttcgagaagtagttgaaacccccctacttcatccagagagg
tttgttaaccttggcattgagcctcctaagggtgtgctgctctttggtccaccgggtaca
ggcaagacactctgtgctcgggcagttgctaataggaccgatgcttgcttcattcgagtt
attggatctgaacttgtgcagaagtacgtcggtgagggggctcgaatggttcgagagctc
tttgaaatggccagaacaaagaaagcctgccttatcttcttcgatgaaattgatgctatt
ggaggggctcgttttgatgatggtgctggaggtgacaatgaagtgcagaggaccatgttg
gaactgatcaatcagctggatgggtttgatcctcgaggcaacattaaggttctgatggcc
acaaacagacctgacactctggaccccgcgctgatgaggcccgggagactggacaggaag
attgagtttagcttacctgatctagagggccggactcacatttttaagattcatgcccgt
tcaatgagtgttgaaagagatatcagatttgaactgttagcacgactgtgtccaaatagc
actggtgctgagatcagaagcgtctgcacagaagctggtatgtttgccatccgagcacgg
cgaaaaattgctactgagaaggatttcttggaagctgtaaataaggtcatcaagtcctat
gccaaattcagtgctactccgcgctatatgacatacaactga
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