Globicephala melas (long-finned pilot whale): 115840946
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Entry
115840946 CDS
T11080
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04082
Neuroactive ligand signaling
gmf04721
Synaptic vesicle cycle
gmf04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115840946 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
115840946 (SLC6A12)
04721 Synaptic vesicle cycle
115840946 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115840946 (SLC6A12)
Transporters [BR:
gmf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115840946 (SLC6A12)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115840946
NCBI-ProteinID:
XP_060162483
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Position
10:complement(99714620..99741500)
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AA seq
617 aa
AA seq
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MAADDRKVAVPKDGPSVVSWVPEEGEKLDQEGKDQVKDRGQWSNKMEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFFPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWWKICPLLQG
IGLASVVIEAYLNVYYIIILSWALFYLFSSFTSELPWTACTHSWNTEHCMDFPNRSAAGA
AAPPVNFTSPVMEFWERRVLGISSGIHDLGALRWELALCLLLAWVVCYFCIWKGVKSTGK
VVYFTATFPYLMLVILLIRGITLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAI
CQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFAILGFMSQEQGVPISEVAE
SGPGLAFIAFPKAVSMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPRQLRK
SGRRELLILAIVVLCYLIGLFLVTEGGMYIFQLFDYYACSGTCLLFLSVFEVICIGWVYG
ADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLRYNNVYVYPAWGYF
IGWLLAGSSMSCVPLFVVVALLKTQGSFRKRLRQLVTPDPSLPQPKRHLCLDGGSSQDCG
PSPTKAGLMAGEKETHL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgacagaaaagtggcagtccccaaggatgggccttctgtggtctcctgg
gtccctgaggagggagagaagttggaccaggaaggcaaggaccaggtgaaggatcggggc
cagtggagcaacaagatggagttcgtgctgtccgtggccggggagattatcgggctgggc
aacgtctggaggtttccctacctctgctacaaaaacgggggaggagccttcttcttcccc
tacttcatcttcttcttcacctgcggcatcccagtgttctttctggaagtggcgttgggc
cagtacaccagccagggcagcgtcacagcctggtggaagatctgccccctcctccagggc
attggcctggcgtctgtggtcatcgaggcctatctgaacgtctactacatcatcatcctc
tcctgggccctcttctacctgttcagctcctttacctccgagctgccctggactgcctgc
acccactcctggaacacagagcactgcatggacttcccgaaccgctcagcagctggcgcg
gcggccccgcccgtgaacttcacctcccccgtcatggaattctgggagagacgtgttctg
ggcatcagctccggcatccacgacctgggggccctgcgctgggagctggccctctgcctc
ctgcttgcctgggtcgtctgctacttctgcatctggaagggggtcaagtccacgggcaag
gttgtctacttcacagcgacgttcccctacctaatgctggtcatcctactgatccggggc
atcaccctgcccggagcctacgagggcatcatctactatctaaaaccagatttgcttcgg
ctcaaggacccccaggtgtggatggacgcaggcacccagatcttcttctccttcgccatc
tgccaggggtgcctgacggccctgggcagctacaacaagtaccacaacaactgctacagg
gacagcatcgccctctgcttcctgaacagcgccaccagcttcgtggccgggtttgtggtc
ttcgccatcctgggcttcatgtcccaggagcagggggtgcccatctctgaggtggccgag
tcaggccccggtctggccttcattgccttccccaaggctgtgagcatgatgcccctgtcc
cagctgtggtcctgcctcttcttcatcatgctcatcttcctcgggctggacagccagttt
gtctgtgtggagtgcctggtgacagcctccgtggacatgttccccaggcagctccggaag
agcgggcggcgggagctcctgatccttgccatcgtggtcctgtgctacctgatcgggctc
ttcctggtcaccgagggcgggatgtacatcttccagctgtttgattattacgcctgcagt
ggcacgtgcctgctgttcctttccgtgtttgaagtgatctgcatcggctgggtgtacggg
gccgaccgtttctatgacaacgtggaggacatgattggctaccggccgtggcccctagtg
aagatctcctggctcttcctgaccccgggcctttgcctggccactttcctcttctccttg
agcaagtacacacctctcagatacaacaacgtctacgtgtacccggcctggggctacttc
atcggctggctcctggctggctcctccatgagctgcgtcccactcttcgtcgtcgtcgcc
ctcctgaagacccagggttccttcaggaagcgcctgcggcagctcgtcacccctgacccc
agcctgccacagcccaagcgacacctgtgtctggacggtggcagcagccaggactgcggg
ccctccccaacgaaggcgggtctcatggccggggagaaggagacgcacttgtag
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