KEGG   Globicephala melas (long-finned pilot whale): 115841053
Entry
115841053         CDS       T11080                                 
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3
  KO
K03159  lymphotoxin beta receptor TNFR superfamily member 3
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04060  Cytokine-cytokine receptor interaction
gmf04061  Viral protein interaction with cytokine and cytokine receptor
gmf04064  NF-kappa B signaling pathway
gmf04066  HIF-1 signaling pathway
gmf04672  Intestinal immune network for IgA production
gmf05166  Human T-cell leukemia virus 1 infection
gmf05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    115841053 (LTBR)
   04066 HIF-1 signaling pathway
    115841053 (LTBR)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    115841053 (LTBR)
   04061 Viral protein interaction with cytokine and cytokine receptor
    115841053 (LTBR)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115841053 (LTBR)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    115841053 (LTBR)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    115841053 (LTBR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:gmf04050]
    115841053 (LTBR)
Cytokine receptors [BR:gmf04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   115841053 (LTBR)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 115841053
NCBI-ProteinID: XP_030690518
LinkDB
Position
10:complement(96566611..96573237)
AA seq 421 aa
MRLPWAASPCVLAWGPLILGLWGLLAASQLQLVPPYRTENQTCRDRETEYYEPKHHVCCS
RCPPGTHVSAECGPDQDTTCATCPENSYNEHWNHLSICQLCRPCDRMLGFMEITPCTSKH
KTQCRCQPGLFCVFWGSECVHCESLSHCPPGTEAELKDEDRKANSNCVPCKAGHFQNTSS
PSARCQPHTRCEDQGLVEAAPGTSRSDTSCRNPPEPSEMPGTMLVLAVLLPLVSLLLLTT
VFACTWKSHPSLCRKLGSLLKRHPEGEESNTAEGSWEPPRVNPQYPDLVEPLLPTSGDLT
PASAGLPASPGLEEEALQQQSPLSQARELEAELPEQGQVAHGTNGIHVTGGSVTVTGNIY
IYNGPVLGGARGPGDTPAPPEPPYPIPEEGAPSPPGLSTPYQEDGKAWHLAETETLGCHT
P
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgcctgccgtgggccgcctccccctgcgtcctggcctgggggccgctcatattgggc
ctctggggtctcctggcagcatcccagctccagctggtgcccccgtaccgcacggagaac
caaacctgccgggaccgggaaacggagtactacgagcccaagcatcacgtctgctgctcc
cgctgccccccaggcacacacgtctcggccgaatgtggccccgaccaggacaccacttgt
gccacgtgccccgaaaattcctacaacgagcactggaaccatctctccatctgccagctg
tgccgcccctgtgaccggatgctgggcttcatggagatcacgccttgcactagcaaacac
aaaacccagtgccgctgccagccaggactcttctgcgtcttttggggctctgagtgtgta
cactgcgagtcactctcccactgcccgcctggcactgaagccgagctcaaagatgaagac
aggaaggctaacagcaactgtgttccctgtaaggcagggcacttccagaacacctcctcc
cccagcgcccgctgccagccccacaccaggtgtgaggaccagggcctcgtagaggcagcg
ccaggcacctcccggtctgacaccagctgcagaaatccgccagagccctccgagatgcca
ggaacgatgctggtgctggccgtcttgctgccgctggtctccttgctgcttctcaccact
gtgttcgcctgcacctggaagagccacccctctctctgcagaaagctgggatccctgctc
aagaggcacccagagggagaggaatcaaatactgctgaaggaagctgggagcccccgagg
gtcaacccacagtaccctgacctggtagagccacttctgcccacctctggagacttgacc
ccagcttcggccgggctcccggcgtccccaggtttggaggaagaggcactacaacagcag
agtcctctgagccaggccagggagctggaggctgagctcccagagcaaggccaggtggcc
cacggcaccaatggcattcacgtcaccggcgggtctgtgactgtcaccggcaacatctac
atctacaacgggccagtactggggggagcacggggccccggagacacccccgctccccca
gagcctccgtaccccatccctgaagagggtgcccctagccctcccgggctctccacaccc
taccaggaggatggcaaagcttggcacctggctgagacagagacactggggtgccacacc
ccctaa

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