Globicephala melas (long-finned pilot whale): 115841524
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Entry
115841524 CDS
T11080
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115841524 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmf03009
]
115841524 (RRP1B)
Protein phosphatases and associated proteins [BR:
gmf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115841524 (RRP1B)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115841524 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
TAN
Motif
Other DBs
NCBI-GeneID:
115841524
NCBI-ProteinID:
XP_030691378
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All DBs
Position
4:complement(2360204..2386319)
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AA seq
719 aa
AA seq
DB search
MAPAMQPAEIQFAQRLASHEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFY
CLWVQDEPLLQEELANTISQLIHVVNSSEAQHLFIQTFWQTVNREWPDIDGLRLDKYHML
IRLVLRQSFEVLKRNGWEESRIKLFLDVLMKEILHPESQSPNGVKFHFIDIYLDELSKVG
GKELLADQNLKFIDPFCKVAAKTKDQTLVQTIARGVFEVIVDQSPFAPEETVEEQKTKVG
DSDLSEEETSGNEMTWRKAISRKKTALGRKEGVAEEGRRGGGGGVEDTGLLLQFDYKAVA
DRLLEITNRKNIPPFNRKRLSKLIKKFQDLSEAGSISHLSFAEDASADEDDQSLSQGRHK
KKGNKLLEKTGMERGKGAKFSPAEEEESAGSVPKRKRKKKKKNHLRPEHLGPGGEATCPE
QNGSRQPEAGPGRAQEASAAELGTVATSWPREQSSSEPASVHSRRRRLRKRSLRVQVESP
EAAALAGGTPVLKRTRELGALLVNGGGPPTLAWPLPPPASPADRGDCPATLPQGGKLKKR
RRESGGHDLHDLSAQKAAVLKKRKKVKEMSKWAEHRGVKLVQALGSGGALSPLRKQLRTQ
RDFVKFDASSSPKPLFFRKAKGSGAATSPGPGLQPHRTPSSSKKVTFGLNRNTTAEFKKT
DKSILVSPTGPSRVAFNPEQRPLHGVLKTPSSSPASTPLGTKKPLTGTPKRRPTAIDFF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgccatgcagccggccgagatccagttcgctcagcgcctggcgtcccacgag
aagggcatccgggatcgggcggtgaagaagctgcgccagtatatcagcgtgaagacgcag
agggagacaggaggtttcagccaagaagaacttctaaaaatatggaaagggctcttctat
tgcctgtgggtgcaggatgaaccccttctacaggaggagctagcgaacactatatcccaa
ctcatccatgttgttaacagctcagaggctcagcacctgttcatccagaccttctggcaa
accgtgaaccgggagtggccagacatcgacgggctgcgtctggacaagtaccacatgctg
atccgtctggtcctgaggcagtcctttgaagttctgaagcgaaacggctgggaagaaagc
cgaatcaagcttttcctggatgtcttgatgaaggagatcctgcatcctgagagccagtct
ccgaacggagtgaaattccacttcatcgatatctatctggatgaactgtccaaggtggga
gggaaagagctgctggccgatcagaacctcaagtttattgacccattctgcaaggtggcc
gccaagactaaggaccagactctggtacagactatagctaggggtgtttttgaagtcatt
gtagatcagtctccttttgcacctgaagagacggtcgaggaacagaaaaccaaagtgggt
gacagtgacctctctgaggaagagacgtctggaaatgagatgacgtggagaaaagcaatc
agtagaaagaaaacagcactgggcagaaaagagggagtcgctgaggaaggcagacggggc
ggtggcggaggcgtggaggacaccgggctgcttctccagtttgactataaggcagttgcc
gaccgactcctggaaataaccaacaggaagaacatccctcccttcaacaggaaacgtctc
tccaagctaatcaaaaaattccaagatctttctgaagcaggcagtatctcacacctcagt
tttgctgaggacgcttctgctgacgaagatgaccaaagcctcagtcaagggaggcataag
aagaaagggaacaaacttctggagaaaacgggcatggaaagagggaaaggagccaagttc
tctcctgccgaggaagaggagagcgcaggcagtgttccaaagaggaaaaggaaaaagaag
aagaagaaccacctccggcctgaacacttggggcccggtggtgaggccacgtgcccggag
cagaatggcagccggcagccggaggccggtcccggaagagcccaggaggcgagtgcggct
gagctggggacggtggccacgtcctggccccgggagcagagcagctcggagcccgcctcc
gtgcacagcaggaggagacgactgaggaagagaagcctgagggtccaggtggagagcccg
gaggcagcggccctggctggcggcaccccggtcctgaagaggacgcgcgagctgggcgcc
ctcctggtcaacggcggcggcccgcccacgctggcctggcccctgccccctccagcgagc
ccagcagacagaggggactgccctgccaccctgccccagggcgggaagctgaagaaaagg
aggagagagtccggcggccatgacctccacgacctgtctgctcagaaagctgctgttttg
aaaaagaggaagaaagtgaaagagatgtcaaagtgggcggagcacagaggggtcaagctc
gtgcaggccctggggagcggtggcgcgctcagccctttgaggaagcagctgaggacccag
agggacttcgtgaagtttgacgcctcctcctccccgaagcccctgttcttcaggaaggcc
aagggcagcggggccgccacctcgccaggccccgggctgcagccacacaggacgccgtcc
agctccaagaaggtgacgttcgggctgaacaggaacacgacggcggaattcaagaagacg
gacaagagcatcttggtcagtcccacgggcccctcccgggtggccttcaaccctgagcag
agacccctccacggagtgctgaagacccccagcagctcgccggccagcacgcccctgggg
accaagaagccgctgaccggcacgccaaagaggaggccgacggctatagacttcttctag
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