Globicephala melas (long-finned pilot whale): 115841554
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Entry
115841554 CDS
T11080
Symbol
ITGB2
Name
(RefSeq) integrin beta-2 isoform X1
KO
K06464
integrin beta 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04015
Rap1 signaling pathway
gmf04145
Phagosome
gmf04390
Hippo signaling pathway
gmf04514
Cell adhesion molecule (CAM) interaction
gmf04517
IgSF CAM signaling
gmf04610
Complement and coagulation cascades
gmf04613
Neutrophil extracellular trap formation
gmf04650
Natural killer cell mediated cytotoxicity
gmf04670
Leukocyte transendothelial migration
gmf04810
Regulation of actin cytoskeleton
gmf05133
Pertussis
gmf05134
Legionellosis
gmf05140
Leishmaniasis
gmf05144
Malaria
gmf05146
Amoebiasis
gmf05150
Staphylococcus aureus infection
gmf05152
Tuberculosis
gmf05166
Human T-cell leukemia virus 1 infection
gmf05323
Rheumatoid arthritis
gmf05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
115841554 (ITGB2)
04390 Hippo signaling pathway
115841554 (ITGB2)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115841554 (ITGB2)
04517 IgSF CAM signaling
115841554 (ITGB2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115841554 (ITGB2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115841554 (ITGB2)
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
115841554 (ITGB2)
04613 Neutrophil extracellular trap formation
115841554 (ITGB2)
04650 Natural killer cell mediated cytotoxicity
115841554 (ITGB2)
04670 Leukocyte transendothelial migration
115841554 (ITGB2)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
115841554 (ITGB2)
09171 Infectious disease: bacterial
05133 Pertussis
115841554 (ITGB2)
05134 Legionellosis
115841554 (ITGB2)
05150 Staphylococcus aureus infection
115841554 (ITGB2)
05152 Tuberculosis
115841554 (ITGB2)
09174 Infectious disease: parasitic
05146 Amoebiasis
115841554 (ITGB2)
05144 Malaria
115841554 (ITGB2)
05140 Leishmaniasis
115841554 (ITGB2)
09163 Immune disease
05323 Rheumatoid arthritis
115841554 (ITGB2)
09166 Cardiovascular disease
05416 Viral myocarditis
115841554 (ITGB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115841554 (ITGB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115841554 (ITGB2)
04515 Cell adhesion molecules [BR:
gmf04515
]
115841554 (ITGB2)
04090 CD molecules [BR:
gmf04090
]
115841554 (ITGB2)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115841554 (ITGB2)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115841554 (ITGB2)
Cell adhesion molecules [BR:
gmf04515
]
Integrins
Integrin beta subunits
115841554 (ITGB2)
CD molecules [BR:
gmf04090
]
Proteins
115841554 (ITGB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115841554
NCBI-ProteinID:
XP_030691455
LinkDB
All DBs
Position
4:1489738..1529011
Genome browser
AA seq
769 aa
AA seq
DB search
MLRQRPQLLLLGSLLALRSVLSQECTKYRVSTCRDCVESGPGCAWCQKLNFTGQGEPDST
RCDTREQLLSKGCATDDIIDPRSHATTQEDQVGGQKQLSPQKVTLYLRPGQAAVFNVTFQ
RAKGYPIDLYYLMDLSYSMLDDLINVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFV
NTHPEKLRNPCPNKEKECQAPFAFRHVLKLTDNSNQFRTEVGKQLISGNLDAPEGGLDAM
MQVAACPEEIGWRNVTRLLVFATDDGFHFAGDGKLGAILTPNDGHCHLEDNMYKSSNEFD
YPSVGQLAHKLAESNIQPIFAVTKRMVATYEKLTEIIPKSAVGELSDDSSNVVQLIKNAY
NKLSSRVFLDHNTLPDTLKVTYDSFCSNGVSKVDQPRGDCDGVQINVPITFQVKVTATEC
IQEQSFVIRALGFTDTVTVRVLPQCKCRCRDASRDHSLCGGRGSMECGVCRCDAGYIGKN
CECQTQGRSSQELEGSCRKDNGSIICSGLGDCICGQCVCHTSDVPNKKIYGQFCECDNVN
CERYDGQVCGGEKRGLCFCGTCRCHNGHEGSACQCLKSTKGCLNLDGVECSGRGRCRCNV
CQCDPGYQPPLCLECPGCPAPCARYANCAECLKFDQGPFAKNCSAACGETKLLPRPLPGR
TCKERDSEGCWMTYTLLQREGRDRYDVHVNDTRECVKGPNVAAIVGGTVAGVVLVGLLLL
GIWKVLTHLSDLREYKRFEKEKLKSQWNNDNPLFKSATTTVMNPKFAES
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccagcgcccccagctgctgctcctggggagcctgctcgccctccggtctgtc
ctttcccaggagtgcaccaagtacagagtcagcacctgccgggactgcgttgagtcaggg
cctggctgcgcctggtgccagaagctgaacttcacggggcaaggggagcctgactccact
cgctgtgacacgcgggagcagctgctgtcaaagggctgcgcgacggatgacatcatcgac
cccaggagccacgccacgacccaggaggaccaggtggggggccagaagcagctgtcccca
cagaaagtgacactctacctgagaccaggtcaggcggctgtgttcaacgtgaccttccag
cgggccaagggctaccccatcgacctgtactacctgatggacctctcatactccatgctg
gacgacctcatcaacgtcaagaagctggggggcgacctgctccgggccctcaacgagatc
accgagtccggccgcatcggcttcgggtccttcgtggacaagacggtgctccccttcgtc
aacacgcaccccgagaagctgcggaacccgtgccccaacaaggagaaggagtgccaggcc
ccgttcgcctttcggcacgtgctgaaactcaccgacaactccaatcagttccggacggag
gtcgggaagcagctgatctcgggaaacttggacgcccccgagggtgggctggacgccatg
atgcaagtcgccgcgtgcccggaggagatcggctggcgcaacgtcaccagactgctggtg
tttgccacggatgacggcttccactttgcgggagacgggaagctgggcgccatcctcact
cccaacgacggccactgccacctggaggacaacatgtataaaagcagcaacgaattcgac
tacccatcggtgggccagctggcacacaagctggcagaaagcaatatccagcccatcttc
gctgtgaccaagagaatggtggcaacgtacgagaagctcacggagatcatccccaagtct
gcagtcggggagctgtcagacgactccagcaacgtagtccagcttattaagaacgcctac
aacaaactgtcctccagagtctttctggatcacaacaccctccctgacaccctgaaagtc
acctacgactccttctgcagtaacggggtatcgaaggtggaccagcccagaggggactgc
gacggcgtccagatcaacgtgccgatcaccttccaggtgaaggtcacagccacagagtgc
atccaggagcagtcattcgtcatccgggcgctgggcttcacggacacggtgactgtgcgg
gtcctcccccagtgcaagtgccggtgccgggacgcgagccgggaccacagcctctgcggc
ggcaggggctccatggagtgcggagtctgcaggtgcgacgccggctacatagggaagaac
tgcgagtgccagacgcagggccggagcagccaggagctggagggaagctgccggaaggac
aacggctccatcatctgctcggggctgggggactgcatctgcgggcagtgcgtgtgccac
acgagcgatgtgcccaacaagaagatctacggccagttctgcgagtgtgacaacgtcaac
tgcgagcgctacgacggccaagtctgcgggggcgagaagcgagggctctgcttctgcggc
acctgcaggtgccacaacggccacgagggctcggcgtgccagtgcctcaagtctacgaag
ggctgcctcaacctggatggcgtcgagtgcagcggccgcggccggtgccgctgcaacgtg
tgccagtgcgaccccggctaccagccgcccctgtgcctcgagtgcccgggctgccccgcg
ccctgcgcccgctacgccaactgcgccgagtgtctgaagttcgaccagggccccttcgcc
aagaactgcagcgcagcgtgcggggagacgaagctgctgcccaggccactgcccggccgc
acgtgcaaggagcgcgactccgagggctgctggatgacctacaccctgctgcagcgcgag
gggcgggacagatacgacgtgcacgtgaacgacacgcgcgagtgcgtgaagggccccaac
gtcgccgccatcgtggggggcaccgtggcaggcgtcgtgctcgtcggcctcctcctgctg
ggcatctggaaggtcctgacccacctgagtgacctcagggagtacaagcgcttcgagaag
gagaagctgaagtcccagtggaataacgacaacccccttttcaagagcgccaccacgaca
gtcatgaaccctaagtttgctgagagttag
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