Globicephala melas (long-finned pilot whale): 115841636
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Entry
115841636 CDS
T11080
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X3
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04136
Autophagy - other
gmf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115841636 (ATG4A)
04136 Autophagy - other
115841636 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmf01002
]
115841636 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115841636 (ATG4A)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115841636 (ATG4A)
Peptidases and inhibitors [BR:
gmf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
115841636 (ATG4A)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115841636 (ATG4A)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115841636 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
115841636
NCBI-ProteinID:
XP_030691638
LinkDB
All DBs
Position
X:complement(36319265..36383506)
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AA seq
398 aa
AA seq
DB search
MESVLSKYENQITIFADYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWERQKEQPKEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCHTLPLSAETAAESPPESLNASTQSKGPSACSPAWKPLLLIVPLRLGINQINPVY
VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPHTTQTFVDTEENGTVDDQTF
HCLQPPQRMNILNLDPSVALGFFCKEEKDFDSWCSLVQKEILKENLRMFELVQKHPSHWP
PFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttttatccaagtatgaaaaccagattactattttcgctgactacctagaa
gaatttccagatacagatgagctggtatggatcttggggaaacagcatcttcttaaaacc
gaaaaatctaagctgttgtctgatataagtgctcgtctgtggtttacatacagaaggaaa
ttttcaccgattgggggaacgggcccttcgtcagacgccggctggggatgtatgctacgc
tgtggacagatgatgctggctcaagcccttatctgcagacacttgggcagggactggaac
tgggagagacagaaagaacaacccaaagaataccaacgaatcctacagtgcttcctagat
agaaaagactgttgctactctatccatcaaatggcacagatgggtgtaggagaagggaaa
tcaattggcgaatggtttggaccaaatacagttgcacaggtgttaaaaaaacttgcttta
tttgatgaatggaattccttggctgtttatgtttcaatggataacaccgtggttattgaa
gatatcaaaaaaatgtgccacaccctccccttgagtgctgaaacagctgccgagagcccc
cctgagtctctgaatgcttcgacccagagtaagggcccctctgcctgctctccagcctgg
aaacccttgctgctcattgtgcccctccgcctgggcataaaccaaatcaatcctgtctat
gtcgacgccttcaaagagtgttttaagatgccacagtctttaggggcattaggaggaaaa
ccaaataacgcctattatttcataggattcttaggtgatgagctcattttcctggaccct
cacacaacccagacctttgttgacactgaggagaacggaacggttgacgaccagactttc
cattgtctgcaacctccacagcgaatgaacatcctgaacttggatccttccgtagcattg
ggatttttctgcaaagaagaaaaagactttgatagctggtgtagccttgttcagaaggaa
attctaaaggaaaatttaaggatgtttgaattagttcagaaacatccatcacactggcct
ccctttgttcctccagccaagccagaagtgacaaccacgggggcagaattcatcgactct
actgaacaactagaggagtttgacctggaggaagatttcgagattctgagcatatag
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