Globicephala melas (long-finned pilot whale): 115841653
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Entry
115841653 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115841653
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115841653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115841653
03041 Spliceosome [BR:
gmf03041
]
115841653
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115841653
mRNA cycle factors
Common to processing body (P body) and stress granule
115841653
Spliceosome [BR:
gmf03041
]
Common components
Common spliceosomal components
hnRNP proteins
115841653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115841653
NCBI-ProteinID:
XP_069900758
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All DBs
Position
X:complement(30448817..30460258)
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AA seq
473 aa
AA seq
DB search
MDKEDVIYCHPPPPLLRRLRTQEIPEPVAGDASSPRSPSSGDLTGSPRPPGSTGCDPEPP
VCSLLSSFGSAASSAWSGQRPPGTSRGSSGGRAEGAGGEGNIPSSHRAALADSSHRRRRR
RGEESHDSKEPEQLRKLFLGGLSFEPTDDSLREHFEKWGTLTVCVVMRDPQIKRSRGFGV
VTYSCVEEEDAATCARPHKVDGXVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEY
NLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTLNGHKCKVKK
ALSKQEMQSAGSQRGRGGVSGNFMGRGGNFGGGGGNLGRGGNFGGRGGYGGGGGGSRGSY
GGGDGGYNGFGGNGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGYNEGGNFG
GNYGGGGSYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGW
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaagatgtgatctactgccaccctcctcccccgctcctccgccggctccgg
actcaggaaatcccggagccggtcgccggcgacgcctccagcccccgctcgccctcctcg
ggtgacctcacgggctcaccccggcccccgggctccacggggtgcgatcccgagccgccc
gtctgctcccttctcagctcctttggctctgcagcctcgagcgcgtggtcggggcagcgg
ccgcccggcacctcccggggctcctctggaggcagagccgaaggggcggggggcgagggc
aacatcccctcctcccacagagctgcacttgccgactccagccatcgccgccgccgccgc
cggggggaggagagccatgattcaaaggaaccagaacagttgagaaaactgtttcttggt
ggtctgagctttgaacctacagatgatagcttaagagaacattttgagaaatggggcaca
cttacggtttgtgtggtgatgagagacccccaaataaaacgttccaggggctttggtgtt
gtgacttactcttgtgttgaagaggaggatgcagcaacgtgtgctcgaccacacaaggtt
gatggcngtgtagtggaaccaaagagagctgtttctagagaggattccgtaaagcctggt
gcccatctaacagtgaagaaaatttttgttggtggtattaaagaagatacagaagaatat
aatttgagagactactttgaaaagtatggcaagattgaaaccatagaggttatggaagac
aggcagagtggaaaaaagagaggatttgcttttgtaacttttgatgatcatgatacagtt
gataaaattgttgttcaaaaataccacactcttaatgggcataagtgtaaagtgaaaaag
gccctttctaaacaagaaatgcaatctgctggatcacaaagaggtcgtggaggtgtatct
ggcaactttatgggtcgtggaggaaactttggaggtggtggaggtaacttgggccgtggt
ggaaactttggtggaagaggaggctatggtgggggaggtggtggcagcagaggtagttat
ggaggaggtgatggtggatataatggatttggaggcaacggtggtaactatggcggtggt
cctggttacagtagtagaggaggctatggtggtggtggaccaggatatggaaaccaaggt
ggtggatatggtggcggtggtggaggatatgatggttacaatgaaggaggaaattttgga
ggtaactatggtggtggtgggagctataatgattttggaaattatagtggacaacagcaa
tcaaattatggacccatgaaggggggcagttttggtggaagaagctcgggaagtccctat
ggtggtggttatggatctggtggtggaagtggtggatggtag
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integrated database retrieval system
