Globicephala melas (long-finned pilot whale): 115841933
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Entry
115841933 CDS
T11080
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00600
Sphingolipid metabolism
gmf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115841933 (SMPD4)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115841933 (SMPD4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
115841933
NCBI-ProteinID:
XP_060166727
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All DBs
Position
13:complement(63516877..63537535)
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AA seq
884 aa
AA seq
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MYEEPSEPGLACGKCHTSLTKCSQGLPATDLAPGLDTVDGRHWSSKTARLDPAQEAAMAF
PHLQQPSFLLASLKADSVSKPFAQRCQDLVKVIEDFPAKELHAIFPWLVESIFGSLDGVL
AGWNLRCLQGRVSPVEYSIAMEFLDPGGPMMKLVYKLQAEDYKFDFPVSYLPDPVKASIQ
ERVLPDSPLYHNKVQLPAAGGLGLHLALNPFEYYMFFFALSLITQKPPPGALHIRTSDCA
YFILVDRYLAWFLPTEGSVLPPLSSSPGGPSPSPAPRTPAVPFASYGLHHTSLLKRHISH
QTSVNADPTSHEIWRSETLLQVFVEMWLHHYSLEMYQKMQSPHAKLEVLHYRLSVCSALH
SPAQPSLQALHAHQESFMPTEEHVLVVRLLLKHLHAFANSLRPEQASPSAHSHAASPLEE
FKRAAVPRFVQQKLYLFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKQAPSSDCQA
RSVSERWAPFVQENLLVYTKLFLGFLSRALRTDLVSPKNALMVFRVAKVFAQPNLAEMIQ
RGEQLFLEPELVIPHRQHRLFTVPTFTGSFLSSWPPAITDASFKVKSHVYSLEGQDCKYT
PMFGPEIRALVLRLAQLITQAKQTAKSLSDQYGESTAARPFLSWLGFYPADTNGSYPGND
LDEMGQDSVRKTDEYLEKALEYLCQVFRLSEAQLAQLTLALGTTQDENGKKQLPDCIVGE
DGLILTPLGRYQIINGLRRFDIEYQGDSELQPIRSYEIASLVRVLFRLSSAINRRFSGQM
AALCSRADFLGSFCRYHLLEPGLSDRRLLSPVGRGHAASLARGPRLSLRFLGSYRTLLAL
LLAFFVASLFCIGPLLCALLLVLGYVLYAVAMTLLTEQGKLHQL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagaaccctcagaaccaggcctggcatgtggcaagtgccacacaagcttaacc
aagtgttcccaagggctccctgccacagacctggctccggggctggacactgtggacggc
aggcactggtcctctaagacggcccgtctggaccctgcccaggaggctgccatggcattc
ccccacctgcagcagcccagcttcctactggctagcctgaaagccgactctgtaagtaaa
ccctttgcacagcggtgccaagacttggttaaagtcatcgaggactttccagcaaaggag
ctgcacgccatcttcccgtggctggttgagagcatttttggcagcttggacggcgtcctg
gctgggtggaacctccgctgcttgcagggccgcgtgagccctgtggagtacagtatcgcc
atggaattcctagaccccgggggcccaatgatgaagttggtttataaacttcaagctgaa
gactataaatttgactttcctgtctcttacctgcctgaccctgtgaaggcgtccatccag
gagcgcgtgctccccgacagccctctataccacaacaaggtccagctccccgcagccggg
ggccttggcctgcacctggccctcaatccattcgagtattacatgttcttctttgccttg
agcctcatcactcaaaagccgccccccggggccctccacatccgcacttcagactgcgcc
tacttcatcctggtggacaggtacctggcgtggttcctgcccacagaaggcagcgtgctc
ccccctctctcctccagcccgggggggcccagcccctcaccggctcccaggacgccagcc
gtgccttttgcatcctacggcctgcaccacaccagcctcctgaagcgacacatctctcat
cagacgtctgtgaatgcagaccccacctcccacgagatctggaggtcggagacgctactc
caggtttttgttgaaatgtggcttcatcattattctttggagatgtaccaaaaaatgcag
tcccctcacgccaagctggaggtcctgcactaccgtctcagtgtctgcagcgccctccac
agccctgcccaacccagcctccaggccctccacgcccaccaagagtccttcatgcccacc
gaggagcatgtgctggtggtgcggctgctgctgaagcacctgcacgccttcgccaacagc
ctgcggcccgagcaggcctcgccctctgcgcactcccacgccgccagccccctggaggag
ttcaaacgggccgccgtcccgaggtttgtccagcagaagctctacctctttctgcagcac
tgctttggccactggcccctggacgcgtcgttcagagctgtcctggagatgtggctgagc
tacctgcagccctggaggtacgcgcctgagaagcaggccccaagcagcgactgccaggcc
cggagtgtgtcagagagatgggcgcccttcgtgcaagagaacctgcttgtgtacaccaag
ctcttcctcggcttcctgagccgcgcactgcgcacggaccttgtcagccccaagaacgca
ctcatggtgttccgcgtggccaaggtcttcgcgcagccaaacctggctgagatgatccag
cggggcgagcagctgtttctggagcccgagctggtcatcccccaccgccagcacaggctc
ttcacggtgcccacgttcactggcagcttcctgtcgtcatggccaccagccatcaccgac
gcctccttcaaggtgaagagccacgtgtacagcctggagggccaggactgcaagtacacc
ccaatgttcgggcccgagatccgggcactggtcttgcgtctggctcagcttatcacacag
gccaagcagacggccaagtccctctctgaccagtatggggagagcacggccgcccgtccc
ttcctgtcgtggctgggcttctaccccgcggacaccaatggctcctacccgggcaatgac
ctggatgagatggggcaggacagcgtccgcaagacggacgagtacctggagaaggccctg
gagtacctgtgccaagtgttccggctcagcgaggcccagctcgcccagctcacactcgcc
ctggggaccacgcaggatgagaacgggaagaagcagctcccagactgcatcgtgggggag
gacggactcatcctcacacccctgggccggtatcagatcatcaacgggcttcggcgcttt
gacatcgagtaccaaggagactcggagctgcagcccatccggagctacgagattgccagc
ctggtccgagtgctcttccgactgtcctccgccatcaaccgcaggttctcaggtcagatg
gcggccctgtgttcacgggccgacttcctcggcagcttctgtcgctaccacctcctggag
cctgggctgtcggacaggcgcctgctgagccccgtggggcgggggcatgcggccagcctt
gcccggggcccccggctcagcctgcgcttcctgggcagctaccggacgctgctggccctg
ctgctggccttcttcgtggcctctctgttctgcatcgggcctctgctctgtgccctgctc
cttgtgctgggctatgtcctctacgccgtggccatgacactgctaaccgagcagggcaag
ctgcaccagctctga
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