Globicephala melas (long-finned pilot whale): 115841991
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Entry
115841991 CDS
T11080
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04151
PI3K-Akt signaling pathway
gmf04510
Focal adhesion
gmf04512
ECM-receptor interaction
gmf04820
Cytoskeleton in muscle cells
gmf05145
Toxoplasmosis
gmf05146
Amoebiasis
gmf05165
Human papillomavirus infection
gmf05200
Pathways in cancer
gmf05222
Small cell lung cancer
gmf05410
Hypertrophic cardiomyopathy
gmf05412
Arrhythmogenic right ventricular cardiomyopathy
gmf05414
Dilated cardiomyopathy
gmf05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
115841991 (LAMA1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115841991 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115841991 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115841991 (LAMA1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115841991 (LAMA1)
09162 Cancer: specific types
05222 Small cell lung cancer
115841991 (LAMA1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
115841991 (LAMA1)
09174 Infectious disease: parasitic
05146 Amoebiasis
115841991 (LAMA1)
05145 Toxoplasmosis
115841991 (LAMA1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
115841991 (LAMA1)
05412 Arrhythmogenic right ventricular cardiomyopathy
115841991 (LAMA1)
05414 Dilated cardiomyopathy
115841991 (LAMA1)
05416 Viral myocarditis
115841991 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_I
Laminin_N
EGF_LMN_ATRN
Laminin_II
Laminin_G_3
3keto-disac_hyd
DUF5994
Motif
Other DBs
NCBI-GeneID:
115841991
NCBI-ProteinID:
XP_060167125
LinkDB
All DBs
Position
13:complement(58094234..58259223)
Genome browser
AA seq
3081 aa
AA seq
DB search
MRGGGAGLALLASLLWVAVQGQQRGLFPAILNLASNAHISTNATCGEKGPETYCKLVEHV
PRRAMRNAQCRLCDGSSANAKERHPISNAIDGTNSWWQSPSIQNGREYHWVTITLDLRQV
FQVAYVIIKAANAPRPGNWILEHSLDGMEFSPWQYYAVSDTECLTHYNITPRRGPPTYRA
DDEVICTSYYSRLVPLEHGEIHTSLINGRPSSDDLSPKLLEFTSARYIRLRLQRIRTLNA
DLMTLSHRDPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDETIKKFQCQCEHNT
CGDSCNRCCPGYRQQPWRPGTVSSGNTCEECNCHNKAKDCYYDENVANQKRSLNTAGQFR
GGGVCIDCLQKTMGINCETCVDGYYRPHRVSPYDDNPCHPCDCDPLGSLSSVCIKNDLHS
DLHRGKWPGQCPCKEGYAGEKCDRCQFGYKGYPACVPCDCNPAGSVNGEPCSEACLCKEN
VEGKHCDRCKPGFYNLEERNPQGCSECFCFGVSDVCDSLSWPISQVKDMSGWLVTDLVSS
SQLRSQQDMLGGRHQISINSSAVVQRLTSQYYWSAPEAYLGNKLTAFGGFLKYTVSYEVP
VEMADGDPMSHADVIIKGNGLTLRTQAEGLLLQPYEEHLNVVRLVPEHFRDFHSRREVDR
DQLMTVLANMTHLLIRADYNSAKMALYRLDSVSLDTASPNVIDLSLATEVEHCECPQGYA
GISCESCLPGYYRVDGILFGGICQPCECHGHAAECDVHGVCFACQHNTTGDRCERCLPGF
YGLPSRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEVFCDQCAPGYAGDWCERCADGYF
GNPTVPGDSCVPCNCSGNVDPLEARSCDSVTGECLRCLGNTDGPHCERCAYGFYGDAVTA
KNCRACECHGQGSLSAACHPETGLCDCKPHVTGQQCNQCLHGYYGLDTGLGCLPCNCSAS
GSLSNDCTEEGQCRCGPGVAGERCDRCARGFHAYQDGGCTPCDCAHTQNTCDPESGECVC
PPHTRGAACEGCVDGYWGHDPELGCQACNCSSAGSASHHCDVLTGHCQCKPAFGGQTCHQ
CSLGYRDFPDCVACDCDLRGTLADTCGQEQGLCSCAPETGTCSCKENVIGPQCSECRAGT
FALDEADPQGCTPCFCFGLSQLCSEAEGYVRMPVTLGSDQPLLRVVSQSNLKGTTEGVYY
QAPDVLLDAVTVRRHVHTEPFYWRLPGQFQGDQLMAYGSKLRYSVAFYSSSGIGTSNLEP
QVLIKGGRTRKQVIYVDAPAPKNGLRQEQEVGMKENFWKYFNSVSEEPVTRSDFMSVLSN
IEYILIKASYGQGLQQSRISNISMEVGRKAEESHPKREVASLLEKCLCPPGTAGFSCQDC
APGYHRGKLPEGDGRRPRPLLAPCVPCNCNKHSDTCDPETGKCLNCSHNTAGDHCDVCAP
GYYGKVTGSASDCSLCTCPHGLPASFSPTCVLEGDHDFRCDACFPGYEGQYCERCSLGYR
GNPQMPGGTCQRCDCSPHGSVHGDCDRGSGQCVCRPGATGLRCEDCEPRHILVESDCVSC
DDECGGVLLNDMDHVGDAIVSVNLSGIIPVPYGILSNLENTTKYLRDSFLKENIQKELAK
IQLEGVSEQTEDLQRKLDRVLTRSQHVTRATERILNKSRDLLTFTEKLQADIQEIIERAA
TLNQTLDEDVQLPSSTLQNMQKNITSLLEIIQKRNFLQLHQNATLGLKAAEDLLSQIQKN
YQKPQQELEVLKEAASSLLSRHSSKVQAAEELLREAERKTQESRRLLFIVRANLREFSDK
KLRVQEEQNLTSVLIAEGRGLLDAATAPANASGKALAQLEHHRDELLLWTAKIRHHVDDL
VMQMSKRRALDLVYRAEDHATELQRLAGALDSGLGNVSHVSLNATSATHVHSNIRSLIEE
SEKLVKDTLRTERKASVASESLVSNGKAALQRSAEFLKEGNSLSRKHGGITLELSELKNT
AKRFQENADKITKQTNESLLILRAIPEGVRDKGAKIKELATSANQSATSTLKSVVGLGQK
LLNTSTDLSRVNATLRETEELLRDSSVTTLLAGRKVKDVETQANLLFDRLKPLKMLEENL
SRNLSEIKLLISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNSLTLNVKTSEPDNLL
FYLGSSISADFLAVEMRRGKVAFLWDLGSGSTRLEFPDFPIDDSKWHSIYVTRFGNIGSV
SVKEMSASQKPPPKTSKSPGTANVLDVNNSTLMFVGGLGGQIKKSPAVKVTHFKGCMGEA
FLNGQSIGLWNYIEREGKCHGCFGSPQNEGASFHFDGSGYSVVEKMLRATVTQIIMLFST
FSPNGLLLYLASNGTKDFLSIDLVDGRVRVTVDLGSGPLALTTDRRYNNGTWYKIAFQRN
RKQGLLAVIDAYNTSYKETKQGETPGASSDLNRLDKDPIYVGGLPRSRVVRKGVTSKSYV
GCIKNLEISRSTFDLLRNSYGVRKGCILEPVRSVSFLRGGYVELPPKSLSPDSELLATFA
TRNSSGIILAALGQHGEKQGHRQAHKPFFSIMLIEGHIEVHVNPGDGTSLRRALLHAPTG
TYGDGQEHSISLIRTGRIITVQLDETAPVEMKLGPSAESRTISVSNLYIGGVPEGEGTPM
LKMRSSFHGCIQNLIFNMELLDFTSATGYEHVDLDSCLLSERPKLAFHGEDGELLPEPQP
LPSPELCAVDRAPEYVPNARQFGLAGGSHLVLPFNQLAVRKRLLVQLSIRTFASSGLVYY
MAHQNQVDYATLQLHGGRLHFMFDLGKGRTKVSHPALLSDGQWHTVKTEYFKRKGFMTVD
GQESPMVTTAGDATTLDVEGKLYLGGLPSEYRARNIGNITHSIPACIGEVTVNSKQLDKD
SPVSAFAVNRCYAAAQEGTFFEGSGYAALVKEGYKVRSDVNITLEFRTSSENGVLLGISS
AKVDAIGLEIVNGKLLFHVNNGAGRITATYEPSAPNTLCDGRWHTLQANKSKHRVVLIVD
GNAVRAESLHTQSTSADTNNPIYVGGYPADVKQNCLSSQTSFWGCLRKLTLIKGPQVQSY
DFSTAFDLQGVFPHSCPGTES
NT seq
9246 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcggcggcgcggggctggcgctcctggcctcgctgctctgggtcgccgtgcag
ggccagcagagagggctgttccctgccattctcaaccttgccagcaatgcccacatcagc
accaacgcgacctgcggggagaaggggccggagacatactgcaagctggtggagcacgtg
cccaggagggccatgcgcaacgcccagtgccggctctgcgacggcagcagtgccaacgcc
aaagaacgccatcccatatcaaatgccatcgatggcacgaatagctggtggcagagtcct
agcatccaaaacgggagagagtaccactgggtcacaatcactctggacttgagacaggtc
tttcaagtcgcttatgtcatcatcaaagctgctaatgcccctcggcctggaaactggatt
ttggagcattctctggacggcatggagttcagcccctggcagtactatgcagttagtgac
acggaatgtttgactcattacaatatcactccaagacgggggccgcccacttacagggca
gacgacgaagtgatctgcacctcctattactccaggctggtgccgcttgagcacggagag
attcatacatcgctaatcaatggcagaccaagctctgatgatctttcacccaagttgttg
gaatttacttctgcacgatacatccgcctgcgcttacagcgcattcgaaccctcaatgcc
gatcttatgaccctcagccaccgggaccctaaagacctcgaccctattgtcacaagacga
tattactattcaataaaagacatttctgttggaggaatgtgtatttgttatggccatgct
agtagctgcccatgggatgaaactataaagaaattccagtgtcagtgtgaacataatacg
tgtggtgacagctgcaatcggtgttgtcctgggtaccgtcagcagccctggaggcccggc
actgtttcctctggtaacacgtgtgaagaatgcaattgccacaataaagccaaagactgt
tactatgatgaaaatgtggcgaatcagaagagaagtctgaatactgccggacaattcaga
ggaggaggggtttgtattgattgcctgcagaaaaccatgggcatcaactgtgaaacctgc
gtggatggatattacagaccacacagggtgtcaccttatgatgacaacccttgtcatccc
tgtgactgtgaccctctggggtccctcagttctgtctgtattaagaatgaccttcattct
gacttacacagagggaagtggccgggtcagtgtccgtgcaaggaaggttacgcaggagaa
aaatgtgatcgctgccagtttggttataagggttaccctgcgtgtgtgccctgtgactgt
aacccagccggcagcgtgaatggggaaccctgctccgaggcttgtctctgtaaggagaat
gttgaggggaaacattgtgatcgatgcaaaccaggattctataacttggaggaaaggaac
ccccagggctgctcggaatgcttctgctttggtgtctctgacgtttgcgacagcctctcc
tggccaatcagtcaggtgaaagatatgtccggctggctggtcaccgacttggtcagttcc
agccagctccggtcccagcaggacatgctgggcgggcgtcaccagatcagcatcaacagc
tcggcggtggtgcagaggctgacctcccagtattactggtcggccccggaggcctacctg
ggaaacaagctgacggcgtttggtggattcctgaagtacacggtgtcttacgaggtccca
gtggagatggcggacggtgaccccatgtctcacgccgacgtcatcattaaggggaatggg
ctcactttaaggacccaggcagagggcctgttattgcagccctatgaagagcacttgaac
gtggttagactcgtgcctgagcacttccgagattttcatagcaggagggaggtagatcgc
gaccagctgatgaccgtgcttgccaacatgacacatctcttgatcagagccgactacaat
tctgcaaagatggctctttacaggttggattctgtctctctggacacagccagccctaac
gttatagacctgtccctggccacagaggtggagcattgcgagtgcccccaaggctatgcg
ggcatctcttgtgagtcctgtctccctggctattaccgcgtggatggaatactctttgga
ggaatctgtcagccctgtgaatgccacggccatgcagctgagtgtgacgttcatggcgtt
tgctttgcatgccagcacaacaccaccggggaccgctgcgagcgctgcctgcccggcttc
tacgggctgccttcccgaggaacccctggggactgccagccgtgtgcctgcccgctctcc
acggcctccaacaatttcagccccacctgccacctcgacgatggagatgaagtgttctgt
gaccagtgtgccccaggatacgcgggggattggtgcgagagatgtgcagacggttacttt
ggaaacccaacagtgcccggagattcctgtgtcccttgtaactgcagtggcaatgtggac
cccttggaggccaggagctgtgattccgtcaccggagaatgcctgagatgccttgggaac
actgacggcccccactgtgagaggtgtgcctacgggttctatggggatgccgtgactgcg
aaaaactgccgcgcctgtgaatgccatggccaaggctccctttctgctgcctgccatcct
gagactggactctgtgactgcaaaccacacgtgaccggacagcagtgtaaccagtgcctg
cacggctactacgggttggacacggggctcgggtgcctgccctgtaactgcagtgcatcg
ggctccctgtcgaacgactgcacggaggaaggccagtgtcgctgtggcccaggtgtagct
ggggagaggtgtgacaggtgtgcccgcggcttccatgcctaccaggacggtggctgtaca
ccctgtgactgtgctcacactcagaacacctgtgacccggagtcaggggagtgtgtctgc
ccgcctcatactcggggtgcagcgtgcgaggggtgtgtagacggatactggggccacgac
ccggagctcggatgccaggcctgcaattgcagtagcgcggggtcagccagtcatcactgc
gatgtgctcactggccattgccaatgtaagcctgcatttggtggacagacctgccatcag
tgctccctggggtacagagactttccggactgtgtggcctgtgactgcgacctgagaggg
acactggccgacacctgtggccaggagcagggtctctgcagctgtgccccggagaccgga
acctgctcttgcaaggaaaatgtcattggccctcaatgcagtgagtgtcgagctggcacc
tttgctctggacgaggcggaccctcaggggtgcaccccatgcttctgctttgggctgtca
cagctctgctccgaggccgagggctacgtgagaatgccggtaacgctgggctcagatcag
cctcttctgcgtgtggtttctcagagtaacctcaagggtacgaccgagggagtgtattac
caggcccctgatgtcctcctggatgccgtgaccgtcaggcggcatgtccacacagagccg
ttttactggcggctgcccgggcaatttcagggagaccagctcatggcctacggcagcaaa
ctacggtacagcgtggccttctattcttccagtgggatcggcacctccaacctggagcct
caggtgctcatcaaaggaggccggaccagaaagcaagtcatctatgtggacgcgcccgcc
cccaagaacggactgagacaagagcaggaagtggggatgaaagagaatttttggaaatac
tttaactctgtttctgaagaacctgtcacacgctcagattttatgtctgttcttagcaac
attgagtacatcctcatcaaagcatcttatggccaaggattacagcaaagcagaatctca
aatatttctatggaggttggcagaaaggctgaagagtcgcaccccaagagggaggtggca
tcccttttagagaagtgtctctgtcctcctggcacagctggattctcatgtcaggactgc
gcacctggttaccacagagggaagcttccagaaggtgatggcaggagaccgcgccctcta
ctggctccctgtgtgccttgcaattgcaacaaacacagtgacacctgtgaccctgaaacg
gggaagtgtctgaactgcagccacaacaccgccggagaccactgcgatgtgtgtgccccc
ggctactacgggaaggtgaccggctcggccagcgactgctctctctgcacctgtcctcac
ggcctccctgccagttttagtcccacttgtgtcttggaaggtgatcacgattttcgctgt
gatgcctgttttccaggctacgaaggacaatattgtgaaaggtgctccttgggctaccgt
gggaaccctcagatgccgggcggcacctgccagaggtgtgactgcagcccgcatggctct
gtccacggtgactgtgaccgcgggtccgggcagtgcgtctgcaggccgggggccacgggg
ctccgctgtgaggactgtgaaccaaggcacattctggtggagagcgactgtgtgtcctgt
gacgatgaatgtggaggcgtgctgctgaatgacatggaccatgtgggtgatgccatcgtc
tctgtgaacctctccggcatcatccctgtcccgtatgggattttgtcaaacctggaaaat
acaacgaaatatctccgggactcttttttaaaagaaaatatacagaaagaactggcaaaa
atacagcttgaaggtgtctcagaacaaacagaggacctgcaaaggaagctggacagagtg
ttaacacggagccagcacgtgaccagggccactgaaaggatcctcaacaagagtcgtgac
ctcttgacgtttacggagaagctgcaggcagacatccaagaaatcatcgaaagggcagca
actctaaatcagaccttggatgaagatgtccagttacccagttctactcttcagaatatg
caaaagaacattacttcgttgctggaaatcattcagaaaaggaatttcctgcagttgcac
caaaatgccactcttggactcaaggctgctgaagatttattgtcacaaattcagaaaaat
taccagaaaccacagcaagagttggaggtgttaaaagaagcagcaagcagcctcctttca
agacacagcagtaaagtgcaggccgcagaagagctcctgagggaggcagagaggaagacc
caggaaagcaggcgcctgctgttcattgtcagggccaacctgcgagagttcagcgataaa
aagctgcgtgttcaagaagaacaaaacttgacgtcagtgctaatcgcagaaggaagagga
ctgcttgatgctgccactgcacctgcaaatgcttcaggaaaggctctagcacagttagag
catcaccgggatgagctgcttctatggactgccaaaatcaggcaccacgtagatgacctg
gtcatgcagatgtccaaaagaagagcactggaccttgtctacagagcggaggatcatgcc
actgagctccagagactggcaggtgctctggacagtggccttggaaatgttagtcacgtg
tccctaaatgcgaccagtgcaacccatgtccattccaacatccggagcctgattgaagaa
tcagagaagttggtgaaagatactctcaggactgaaagaaaggcgagcgtggcctcagaa
tctcttgtttctaatgggaaagcggctctccagcgcagtgctgaatttctaaaagaaggc
aatagcctgagcagaaagcatggaggtatcacgttggaactgagtgaattgaaaaatact
gcaaagagatttcaagagaatgctgataaaattactaagcagaccaatgaatcacttttg
atacttagagcaattcctgaaggtgtcagagacaaaggcgccaaaatcaaagagctggcc
acatctgcaaatcagagcgctacgagcactctaaagagtgtcgtgggattgggccagaag
ctgttgaatacgtccactgacctgtccagggttaatgccacgttacgagaaacagaagaa
ctcctccgtgactcctcagtgaccactttgttggctggaagaaaagtcaaagatgtggaa
acacaagcgaaccttttatttgatcggctgaagcctttgaagatgttagaagagaacctg
agcagaaacctatcagaaatcaaactgctgatcagccaggcccggaagcaagcagcgtct
atcaaagttgctgtgtctgcagacagagactgtatccgggcctaccagcctcagatttct
tctaccaactataacagcttaacactaaatgtgaagacaagcgaacctgacaaccttctc
ttctacctggggagtagcatcagtgctgacttcctggcagtggagatgcggcgagggaaa
gtggcgttcctctgggatttgggctccgggtccacacgtttggaatttccagacttcccg
attgatgacagcaaatggcacagtatctatgtaaccaggtttggaaacattggttcggtg
agtgtaaaggaaatgagcgcatctcaaaagccaccaccaaaaacaagtaaatcccctgga
acagctaatgttctggatgtaaacaattcaacactaatgtttgttggagggcttggagga
cagatcaagaagtctcctgctgtgaaggttactcattttaaaggctgcatgggagaggcc
ttcttgaatggacagtcgattggcctatggaactatattgaaagggagggaaagtgccac
ggctgctttggaagcccccaaaatgaaggtgcttccttccattttgatgggagtgggtat
tctgtcgtggagaagatgctccgggctactgtgacgcagataattatgctttttagtacc
ttttcacctaatgggctgcttctctacctggcttcaaatggcaccaaagactttttatcc
atcgacttggtcgacggcagagttagagttacagttgacctgggttctgggcctcttgct
cttactactgacagacgctataataatggaacctggtacaaaattgccttccagcgaaac
agaaagcaaggactcctagcagttattgatgcatataacaccagctacaaagaaaccaag
caaggggaaactccaggagcatcttctgacctcaatcgtctagataaggatccaatttat
gtgggtggattacctaggtcaagagttgtaaggaaaggtgtcaccagcaaaagctacgtg
ggctgtatcaaaaacctggaaatatctagatcgacctttgatttactcagaaattcctac
ggagtgagaaaaggctgtatactggagcctgtccgaagcgttagcttcttgagaggcggc
tacgttgaattgccacccaagtccttgtcaccagattcggaattgttggcaacatttgcc
accaggaacagcagcggcatcatcctggctgccctgggccagcatggggagaagcaaggt
caccggcaggcccacaagcccttcttttccatcatgctaattgaaggccacatcgaagtg
catgttaatcctggggatggaaccagcctgagaagagctctcctgcatgctcccacgggc
acatatggtgacggtcaagagcattccatctccttgataaggaccgggagaattatcact
gtccaactggatgagacagctcctgtggaaatgaagctgggcccatcagcagaaagcagg
acaataagtgtgtccaacctgtacataggcggtgttccagagggcgaggggacacccatg
ctcaagatgagaagctcattccatggctgtatccaaaacctgatctttaacatggaactt
ttggatttcactagtgccactggctatgaacacgtggacttggactcctgcttgctctca
gaacggccaaagctggctttccacggagaggacggcgaactcctgccagagccccagcct
ttaccaagtccagaattgtgtgccgtggacagagccccggagtacgtccccaacgcccgc
cagttcggcctcgcaggaggcagccacttggtgctgccctttaatcagctggctgtcaga
aagaggctcttggtccagctaagtatccgaacattcgcctccagtggcctggtttactac
atggctcatcaaaaccaggttgactacgccacactgcagctgcacgggggccgcctccac
ttcatgttcgatcttgggaagggcagaacaaaagtctcgcaccctgcgctgctcagtgat
ggccagtggcacacggtcaagacagagtactttaaaaggaagggcttcatgacagttgac
ggccaggaatcgcccatggtgaccacggcgggagatgctaccacgttggatgtggaagga
aagttgtacctaggaggccttccctccgagtacagggccaggaacattggaaatatcacc
cacagcatccctgcttgcattggggaggtgacagtgaacagcaaacagctggacaaggac
agcccagtgtctgcatttgcagtaaacaggtgctatgcagcagcccaggaaggaactttc
tttgaaggaagtgggtatgcagcccttgtcaaagaaggctacaaagtacgatcagatgtg
aacattacgctggagtttcgtacctcctcagagaatggtgtcctcctggggatcagcagt
gccaaagtggatgccatcggattagagattgtaaatggcaagctcttgtttcacgttaac
aatggtgctggtaggataacagccacatacgaacccagtgctcccaatactctctgtgat
ggaagatggcacacacttcaggcaaacaaaagcaaacatcgtgtggttctgattgtcgat
gggaatgcagttcgagctgaaagtctacacacccagtctacctctgctgacaccaacaat
cccatttatgttggtggctatcctgctgatgtaaagcaaaactgcctgagcagccagacc
tccttctggggctgtttgagaaaactcactctaattaagggcccacaagtgcaatcctat
gacttcagcacagcttttgacctacaaggagttttccctcattcctgtcctgggactgag
tcctga
DBGET
integrated database retrieval system
