Globicephala melas (long-finned pilot whale): 115842115
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Entry
115842115 CDS
T11080
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05016
Huntington disease
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
115842115 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
115842115 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115842115 (IFT57)
Cilium and associated proteins [BR:
gmf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
115842115 (IFT57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
Mod_r
MCPsignal
DUF745
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
115842115
NCBI-ProteinID:
XP_030692579
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All DBs
Position
4:complement(54785816..54850034)
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AA seq
427 aa
AA seq
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MAAAVVTPSGLEDGVSRSRGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEDLLR
KNNLKPPSRHYFALPTNPGEQFYMFFTLAAWLINKAGHPFEQPQEYDDPNATISNILSEL
RSFGRTADFAPSKLKSGYGAHVCYVLDCLAEEALKYIGFTWKRPTYPVEELEEETVAEDD
AELTLNKVDEEFVEEETDNEENFIDLSLLKAQTYRLDMNESAKQEDILESTTDAAEWNLE
VERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGLLDKLHSEISRTLEKIGS
REKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEMEE
KGSSMTDGAPLVKIKQSLTKLKQETIQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATIIP
ESAIGSY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagtggtcacgccgtcgggtttggaggatggggtttctcggtcccgtggc
gaaggggcaggggaggcggtcgtggaacggggccccggcgcggcctaccacatgttcgtg
gtgatggaggacctggtggagaagctgaagttgctccgctatgaggaggatctcctccgg
aaaaacaacctgaagcccccgtccagacactattttgcactgcctaccaatcctggggaa
cagttctacatgtttttcactcttgctgcttggttgattaataaagcaggacaccccttt
gagcagcctcaagaatatgatgaccctaatgcaacaatctctaacatattatctgaactt
cgatcattcgggagaactgcagattttgctccttcaaaattaaaatcgggttatggagca
catgtatgctatgttcttgactgtttagccgaagaagcattaaaatatattggtttcact
tggaaaagaccaacatacccagtggaagaattagaagaagaaactgttgcagaagatgat
gcagaattaacattaaataaagtggatgaagaatttgtggaagaggagacagacaatgaa
gaaaactttattgatctcagccttttgaaggcccagacctatcgcttggatatgaacgag
tctgccaaacaagaagatattttggaatccacaacagatgctgcggaatggaatctagaa
gtggaacgtgtactaccacaactgaaagtcacgatcaggactgacaataaggattggaga
atccatgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaaggagacc
aagggacttttggacaaacttcatagtgaaattagcaggactctggagaagattggcagc
cgggaaaagtacatcaacaatcagcttgagcacttggttcaagaatatcgtgcagctcaa
gcccagctgagtgaggcaagggagcgttaccagcagggaaacggtggagtaactgaaagg
accagactcctgtctgaggttacagaagagctagaaaaggtaaaacaagaaatggaagaa
aaaggcagcagtatgactgatggtgctcctttggtgaagattaaacagagcttaacgaag
ctgaagcaagaaactattcagatggacattagaatcggtgttgtggaacacacattactc
cagtcaaaactgaaggagaagtccaacatgaccagggacatgcatgccacaatcattcca
gaatctgcaataggctcttattaa
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