Globicephala melas (long-finned pilot whale): 115842124
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Entry
115842124 CDS
T11080
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04514
Cell adhesion molecules
gmf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115842124
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115842124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115842124
04090 CD molecules [BR:
gmf04090
]
115842124
Cell adhesion molecules [BR:
gmf04515
]
Immunoglobulin superfamily
Nectin family
115842124
CD molecules [BR:
gmf04090
]
Proteins
115842124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
I-set
Ig_2
TM_ErbB1
Ig_6
C1-set
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
115842124
NCBI-ProteinID:
XP_030692602
LinkDB
All DBs
Position
4:57477237..57622676
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AA seq
549 aa
AA seq
DB search
MARTLGPAPLCPGGGKAQLSSASPPGAGLLLPPPTPPPLLLLLFPLLLFSRLCGALAGPV
IVEPHVTAVWGKNVSLKCLIEGNETITQILWEKIHGKSAQTVAVHHPQYGFSVQGEYQGR
VLFKNYSLNDATITLHNIGFSDSGQYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDS
LIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIVSQYKLFPTRFAR
GRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPF
KSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYVCKVTNSLGQRSDQKVIYISDPPT
TTTLQPTIQWHPSTADFEDLATEPKKLPFPLSTLATIKDDTIGTIIASVVGGALFVVLVS
VLAGIFCYRRRRTFRGDYFAKNYIPPSDMQKESQIDVLQQDELDSYPDSVKKENKNPVNN
LIRKDYLEEHEKTQWNNVENLSRFERPMDYYEDLKMGMKFVSDEQYDENEDDLVSHVDGS
VISRREWYV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaccctggggccggctccgctgtgtcccggaggcggcaaagcacaactttcc
tccgcttctccccccggggccgggctcctgctgccgcccccgacgccaccgccgctgctg
ctgctgctcttcccgctgctgctcttctcccggctctgtggtgccttagctggaccagtt
attgtggagccacatgtcacagcagtatggggaaagaatgtttcgctgaagtgtttaatt
gaaggaaatgaaactataacacaaattttatgggagaagatacatggcaaaagtgcacag
actgttgcagttcatcatcctcaatatggattttctgttcaaggagaatatcagggaaga
gtcttgtttaaaaactattcacttaatgatgcaacaattactctacataacataggattc
tctgattctggacaatatatatgcaaagctgttaccttcccacttggaaatgctcagtcc
tctacaactgtaactgtattagttgaacccactgtgagcctgataaaagggccagattct
ttaattgatggaggaaatgaaacagtagcagccatttgtatcgcagccactggaaaacca
gttgcacatattgattgggaaggtgatcttggtgaaatggaatccactacgacttctttt
ccaaatgaaacagcaacaattgtcagccaatacaagctttttcctaccagatttgctaga
ggaaggcggattacttgtgttgtaaaacatccagccttggaaaaggacatccgatattct
ttcatattagacatacagtacgctcctgaggtttcagtaacaggctatgatggaaactgg
tttgtaggaagaaaaggtgttaatctcaagtgtaatgctgatgcaaatccaccacccttc
aaatctgtgtggagcaggttggatggacagtggcctgatggtttattggcttcagacaat
actcttcattttgtccatccactgactttcaattattctggtgtttatgtctgtaaagtg
accaattcccttggtcaaagaagtgatcaaaaggtcatctatatttcagatcctcctact
actaccacccttcagcccaccattcaatggcatccctcaactgctgacttcgaggatcta
gcaacagaaccaaaaaaattgcccttcccattgtcaactttggcaacaattaaggatgac
acaattggcacaatcattgctagtgtagtgggtggggctctcttcgtagtacttgtaagt
gttttggctggaatattctgctataggagaagacggacgtttcgtggagactactttgcc
aagaactacattccaccatcagatatgcaaaaagaatcacagatagatgttcttcaacaa
gatgagcttgattcttacccagacagtgtaaaaaaagaaaacaaaaatccagtgaacaat
ctaatacggaaagactatttagaagagcatgaaaaaacacagtggaacaatgtagaaaat
ctcagtaggtttgaaagaccaatggattattatgaagatctaaaaatgggaatgaagttc
gtcagcgatgaacagtatgatgaaaatgaagatgacttagtttcacatgtagatggttcc
gtaatttccaggagggagtggtatgtttag
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