Globicephala melas (long-finned pilot whale): 115842206
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Entry
115842206 CDS
T11080
Symbol
FBH1
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115842206 (FBH1)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115842206 (FBH1)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115842206 (FBH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
UvrD_C_2
F-box
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
115842206
NCBI-ProteinID:
XP_030692750
LinkDB
All DBs
Position
2:complement(25141098..25188620)
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AA seq
1040 aa
AA seq
DB search
MRPFKRKHLTAVDCQHLARSHLAVTQPFGQRWTNRDPNHGLYPRPRTKRGTRGRGCLGYN
PEFFLAGQQRRTNDMAKSNSVGQDSSKDSEDEMIFAAEGHCALPQGGDGAVRPRSSGKRS
RSFEDERNQATGTSQWDGVSRKTPRHHLSLSCRWPREGRQEAEDGVSWFSAQPGESSQEV
EDIGPDPVPDSYYGLLGTSPCQEPQSHICSLPSEVLRHIFAFLPMEDLYWNLSLVCHFWR
EIISDPLFIPWKKLYHRYLMNEEQAVSKVDGILSSYGIEKESDLCVLNLIRYTATTKCSP
SVDPGRALWSLRDHLLLPEAEACVRQHLSDLYAAPAGVNVWALVAAIILLSSSVNDIQQL
LFCLRRPSSTVTMPDITETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQENSCAQAT
EVKEEPSVWPGKKTTIQLTHEQQLILSHKMEPLQVVKIMAFAGTGKTSTLVKYAEKWSES
RFLYVTFNKSIAKQAELVFPSNVICKTFHSMAYGHIGRKYQLKKKLNLFKLTPFMVNSVL
AEGKGGFIRAKLVCKTLENFFASADDELTIDHVPIWCKNSQGQRVMVEQSEKLNGVLEAS
RLWDNMRKLGECKEEAYHMTHDGYLKLWQLSKPLLASFDAIFVDEAQDCTPAIMNIVLSQ
PCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQSFRFGVEIAYVGATILDVCKRVR
KKTLVGGNHQSGIRGDTKGQVALLSRTNANVFDEAVRVTEGEVPARIHLIGGIKSFGLDR
IIDIWTLLQPEEERKRRNLVIKDRFIRRWVHREGFSGFKRYVTAAEDKELEAKIAVVEKY
NIRIPELVERIERCHIEDLDFAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARHNLAQLP
HFRVESFSEDEWNLLYVAVTRARKRLIMTRSLENILTLAGEYFLQAELTSNVLKTGVVRC
CVGQCSNAIPVDTVLTMRKLPITYSNRKENKGGYLCHSCAEQRIGPLAFLTASPEQVRAM
DRTVENIVLPRHEALLFLVF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgtttaagcggaagcatcttacagccgtcgactgccaacatctggctcgcagt
cacttggccgtgacccagcccttcggtcaaagatggacaaacagagacccaaaccacggt
ctctatcctagacccagaaccaaaagagggactagaggtcgaggatgcctgggatacaac
cctgaattcttcctcgctggccagcagcggcgcaccaatgacatggccaaaagcaattct
gtgggccaggacagctctaaggactcggaggacgagatgatttttgctgcagaaggccac
tgcgccctgcctcagggaggtgatggagcagtacggccacgctcgtcagggaagcggtct
cggtccttcgaggacgagaggaatcaagccacagggaccagtcagtgggatggggtttct
aggaagaccccacggcatcatctgtccctgtcgtgcagatggcccagggaaggcaggcag
gaagcagaggacggtgtgtcgtggttctctgcgcagcctggagaatccagccaggaggtg
gaggacattggtcctgatcctgttcctgactcttactatgggcttcttgggacctcgccc
tgccaggaaccccagagccacatctgcagcctgcccagtgaggtcctgaggcacatcttt
gctttcctccccatggaagacctctactggaatctgagcttggtgtgccacttttggagg
gagataatcagtgatccactgttcattccttggaaaaagctgtatcaccgatacctgatg
aatgaagagcaagctgtcagcaaagtggatggcatcctctcgagctatggcatagagaag
gagtcagacctgtgtgtgctgaacctcatccgctacacagccaccactaagtgctccccg
agtgtggaccctggacgggcgttgtggagtctgagggatcacctcctcctccccgaggca
gaggcctgcgtgcgccaacacctctccgatctctacgctgcccctgccggtgtcaacgtg
tgggccttggtggcggccatcatcctcctgtccagcagcgtcaatgacatccagcagctg
ctcttctgcctccggcggcccagctccacagtgaccatgccagacatcaccgagactctg
tactgcattgccgtgttgctctacgccatgagggagaaagggatcaacatcagcaaccgg
attcactacaacattttctattgcctgtatcttcaggagaattcctgtgctcaggccaca
gaagtcaaagaggaaccatcggtctggccaggcaagaaaacaaccatccagctgacacat
gaacaacagctgatcctaagccataagatggaacctctccaggtggtaaaaattatggca
tttgcaggtactgggaagacctccaccctggtcaagtacgctgagaagtggtctgagagc
aggtttctgtacgtgaccttcaacaagagcatcgccaagcaggccgagctcgtcttcccc
agcaatgtcatctgcaagaccttccactccatggcctacgggcacatcgggcgcaagtac
caattgaagaagaagttgaatctcttcaagttaacccccttcatggtcaactctgtcctc
gctgaagggaagggtggcttcataagggccaagctagtatgtaagactctggaaaacttc
tttgcctcggctgacgacgagctgacgattgaccacgtgcccatctggtgtaagaacagc
cagggacagagagtcatggtcgagcagagcgagaagctgaacggtgtcctcgaagcgagc
cgactttgggacaacatgcggaagctgggcgagtgcaaggaggaggcttaccatatgacg
cacgacggctacttgaaactctggcagctcagcaagcctctgctggcctcttttgacgcc
atctttgtggacgaggcccaggactgtaccccagcgatcatgaacatagttctgtctcag
ccatgtgggaaaatcttcgtgggggacccacaccaacagatctataccttccgaggtgca
gtcaacgctctgttcacagtccctcacacgcacgtcttctatctcacacagagttttagg
tttggtgtggaaattgcctatgtgggagctacaatcttggatgtctgcaaacgagtaaga
aaaaagactttggttggaggcaaccatcagagtggcattcgaggtgacacgaaggggcag
gtggccctgctgtcccggaccaacgccaacgtgtttgatgaggccgtccgggtgacggaa
ggagaagtgcctgcccggatccacctgataggggggattaaatcatttggattggacaga
atcattgatatttggacgcttcttcagccggaggaagaacggaagagacgaaacctcgtc
attaaagacaggttcatcagaaggtgggtgcacagagagggcttcagtggcttcaagcgg
tatgtgactgcggccgaggacaaggagctggaagccaagattgcggtcgtggagaagtac
aacatccggattccagagctggtggaaaggatagagagatgccacatagaggacttggac
tttgcagagtacatcttgggcactgtgcacaaggccaaaggcctggagtttgacactgtg
catgtcctagatgatttcgtgaaagtgccttgtgctaggcacaacctcgctcagctgccc
cacttcagagtcgagtcgttttctgaggacgagtggaatttactgtatgtagcagtaact
cgcgccaggaagcgtctcatcatgaccaggtcactggagaacatcttgactttggctggg
gagtatttcttgcaagcagagctgacaagtaatgttttgaagacaggcgtggtccgctgc
tgcgtggggcagtgcagcaacgccatccccgtggacaccgtgctcaccatgcggaagctg
cccatcacctatagcaacaggaaggaaaacaagggtgggtacctgtgccactcatgtgca
gagcagcgcattgggccgctggccttcctgactgcctcccccgagcaggtgcgcgccatg
gaccgcaccgtggagaacatcgtgcttccccggcatgaggccctgctcttccttgtcttc
tga
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