Globicephala melas (long-finned pilot whale): 115842447
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Entry
115842447 CDS
T11080
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115842447 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115842447 (POLR1B)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115842447 (POLR1B)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115842447 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
115842447
NCBI-ProteinID:
XP_030693235
LinkDB
All DBs
Position
12:12243874..12269519
Genome browser
AA seq
1153 aa
AA seq
DB search
MLSGACEAVVGIRCAGGLMDPDGRWRHLPSGPSLKHLTDPSYGIPREQQQPALQELTRAH
VESFNYAVREGLSHAVQAIPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAE
CRGRRSTYRGKLTADISWAVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPKALIQHHEE
AEEMGGYFIINGIEKVIRMLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAV
NMNLHYLENGTVMLNFIYRKELFFFPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSV
SQMLRIVMEEGCSTQKQVLSYLGERFRVKLSLPDWYPNEHAAEFLFSQCICIHLKSNTEK
FYVLCLMTRKLFALAKGECMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLASIKIAIDK
KAQKTNVSLNTENLMKIFTLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNF
IRYLSHFRCVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTTICEVVT
QFVYTASIPALLCNLGVTPVDGAPHRPYSECYPVLLDGVMVGWADKELAPGIADSLRHFK
VLREKRIPPWMEVVLVPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFM
NVAVFEDEVLAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLT
FQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKA
SWERGFAHGSVYKSECIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYG
DPYYSYVNLNTGESFVMYYKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDK
FASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAASHG
LCHDATPFIFSEENSALEYFGEMLKAAGYNYYGTERLYSGISGLELDADIFIGVVYYQRL
RHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCS
DRSVAHVCVKCGSLLSPLLEKPPPSWSTMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAE
LAAMNIKVKLDIV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctttccggcgcgtgtgaagctgttgtcggcatccggtgtgcaggcggactcatggat
cccgacggccggtggcggcacctacccagcgggcccagcctaaagcacttgaccgacccc
tcttacgggatcccgcgcgagcagcaacagccagcgttgcaggagctgacgcgggcgcat
gtcgagtccttcaactacgctgtgcgcgaggggctcagccacgcggtgcaggccatccct
ccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgctgtcatc
agtccacccacagttccaaaagggagcatctgtaaagagctcaatgtttatccagcagaa
tgccggggccgaaggagcacctaccggggaaagctgacggccgatatcagctgggcagtg
aatggaatctcaaaaggcatcattaaacagtttcttggctatgttcccatcatggtgaaa
tccaagctttgcaacttatacaaccttcctccaaaagccctcatccagcaccacgaggaa
gcagaggaaatgggaggctattttataatcaatggcatcgaaaaagtcatccgaatgttg
attatgcctcgcagaaatttccccatcgcaatggtaagaccaaaatggaaaagcagaggg
cctggctatactcagtatggagtttcaatgcactgtgtgagggaagaacattccgccgtc
aatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttaccggaaa
gaactgtttttttttcctttgggatttgcacttaaggcacttgtcagcttttccgattac
cagatttttcaggagctcatcaaaggaaaggaagatgactctttctttaggaactctgtt
tctcagatgttaaggattgtaatggaagagggatgttccacacaaaaacaggtccttagc
tatctgggggaacgcttcagagtaaaactcagtcttcctgactggtacccaaatgaacac
gctgcagagtttctcttcagccagtgcatctgtatccacttgaaatccaacactgaaaag
ttttatgtgctttgtctcatgacccggaagctctttgctttagccaaaggagagtgcatg
gaggagaatcctgacagtttagtgaatcaagaggtcctgacccccgggcagctcttcctc
atgtttctgaaggaaaaattggaagcttggttagcatctattaaaatagctatagacaag
aaggcccagaagaccaatgtgtccttaaacactgaaaatttgatgaagatttttactctg
ggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctacgttctaaa
acaggtctcggcttcctgcaagattccggactttgtgttgtggctgacaagctgaacttc
atacgctatctctcccacttccgctgtgtgcacagaggggcagattttgccaagatgcgg
accaccacagtacgcaggctgctgccggagtcctggggtttcctttgccccgtgcacacc
cccgacggggagccctgtggtctgatgaaccacttaaccaccatatgtgaggttgtcaca
cagtttgtgtatacagcatctattccagctttgctctgcaacttgggcgtcactccagtt
gacggagcgccacatcggccgtacagcgagtgctaccctgtcctgctggacggtgtcatg
gttggctgggcggataaggagcttgctcctggcattgccgattctctccgacattttaag
gttttgagagaaaaaagaattcctccctggatggaggtggtcctggtccccatgacagga
aaaccaagtctgtacccaggattgtacctttttaccactccttgtagactggtgcggcct
gtgcagaacttggaattgggcaaagaagaactaattggaactatggaacagatcttcatg
aacgttgctgtctttgaggatgaggttttggctggcgttaccacccaccaggagctcttc
cctcacagcctgctgagtgtgatcgccaacttcatccctttctctgatcacaaccaaagt
ccaagaaacatgtaccagtgccagatgggtaagcagactatgggctttccactcctaact
tttcaagaccggtcagataataaactgtatcgtcttcagactccacaaagccctttagtg
cgaccatacatgtatgattattatgacatggataactatccaattgggacaaatgccatt
gttgctgttatttcttacactggctatgatatggaagatgccatgattgtgaataaggct
tcttgggaacgaggctttgcccatggaagtgtctacaagtccgagtgtatagatctgtct
gaaaaaatcaaacaaggagatgatagtctggtctttggagtcaaacctggtgacccacgg
attctgcagaagttggatgatgacggattgccatttattggagcacaactgcagtatgga
gatccatattacagctacgtaaacctcaacaccggggaaagctttgtgatgtactataag
agtaaagaaaattgtattgtggataacatcaaagtgtgcagtaatgacaccggaaatggc
aaattcaagtgtgtttgcatcacgatgagagtccctcggaacccaactatcggggataaa
tttgccagtcgtcatgggcagaagggcatcttgagcagactgtggccagttgaggacatg
ccattcactgagagcgggatggttccagacattctgttcaaccctcacggttttccatcc
cgcatgaccatcggtatgctgattgagagtatggcagggaagtctgcagcttcacatggc
ctctgccatgacgccacgcccttcatcttctccgaggagaactcggccctggagtacttt
ggtgagatgttgaaggctgctggctacaactactatggcactgagaggttgtatagtggc
atcagtgggctagagctggatgcagacatcttcataggtgtggtttattaccaacgctta
cgccacatggtctcagacaaattccaagttaggacaacaggagccagagacaaagtcact
aaccagcctatcgggggaagaaacgtccagggtgggatccgtttcggggagatggagcgg
gacgcccttttagctcatggtacatcttttctccttcacgaccggctcttcaactgctcg
gatcggtctgtagcccacgtgtgtgtgaagtgtggtagtttgctctccccgctgttggag
aagccacccccatcgtggtccaccatgcgcaacaggaagtacaactgtactctgtgtaac
cgcagtgacaccatcgacactgtttccgtgccttacgtctttcggtattttgtagctgaa
ctggcagctatgaacatcaaagtgaaactggatatcgtttaa
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