Globicephala melas (long-finned pilot whale): 115842497
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Entry
115842497 CDS
T11080
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115842497 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmf03041
]
115842497 (USP39)
Spliceosome [BR:
gmf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
115842497 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
115842497
NCBI-ProteinID:
XP_030693348
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All DBs
Position
12:complement(14815282..14845833)
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRSSSARVRRERERERETEAPSSRGSPVRVKREVEPASAR
EALAPVIPAVRVKREREADEDSEPEREVRAKNGRMDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtctaagcgggagtcccgtggatccacccgcgggaagcgcgagtccgag
tcgcggagcagctcggctcgtgtcagacgggagcgagagcgggagcgggagacagaggct
ccgagctcccggggcagtccggtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccctggcgcccgtgatcccggcggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggagcctgagcgggaggtgcgagcaaaaaatggccgcatggattctgaggatcgg
aggagccgccactgcccctacctggacaccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcgcatatcaatgcgtatgcctgtctggtgtgtggc
aagtactttcagggccggggtttgaagtctcatgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctcccagacaactatgag
atcatcgattcctcgctggaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagatcgctaacttggacaagcaagccaagttgtcccgggcatatgatggtaccacttac
ctgcccggtatcgtgggcctgaataacataaaggccaacgactacgccaatgccgtcctt
caggctctgtctaacgttcctcctctccgaaactacttcctggaagaagacaattataag
aacatcaagcgtcctcctggggatatcatgttcctgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtgtctccccatgagatgctt
caagctgtcgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagtc
gactttctctcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaaaactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
cctcatcctgatttgccagcagaagaaaaagagcagctgctccacaatgatgagtaccaa
gagacgatggtggagtccacgtttatgtacctgacgctggaccttcctactgcccccctc
tacaaggacgagaaggagcagctcattatcccccaggtgccgctcttcaacatcttggcc
aagttcaacggcatcactgagaaggaatataagacatacaaggagaactttctaaagcgc
ttccagctcaccaagctgcctccatatttaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttccctattacaaatgtggatctg
agagagtacttgtctgaagaagtacaggcggtgcacaagaataccacctacgacctcatc
gccaacattgtacacgacggcaagccctctgagggctcctaccggattcatgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttccccag
atgatcactctgtcggaggcttacattcagatttggaagaggcgagataacgatgaaacc
aaccagcagggggcttga
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