Globicephala melas (long-finned pilot whale): 115842540
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Entry
115842540 CDS
T11080
Symbol
PAX8
Name
(RefSeq) paired box protein Pax-8
KO
K09293
paired box protein 8
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04918
Thyroid hormone synthesis
gmf05200
Pathways in cancer
gmf05202
Transcriptional misregulation in cancer
gmf05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
115842540 (PAX8)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115842540 (PAX8)
05202 Transcriptional misregulation in cancer
115842540 (PAX8)
09162 Cancer: specific types
05216 Thyroid cancer
115842540 (PAX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115842540 (PAX8)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115842540 (PAX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
115842540
NCBI-ProteinID:
XP_060165855
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Position
12:complement(12794189..12820785)
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AA seq
457 aa
AA seq
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MSVLETLERHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
TVPSVSSINRIIRTKVQQPFNLPMDGCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
SITGLLGVAQPGSDSKRKLDDSDQDSCRLSLDSQSSGSGPRKHLRTDAFSQHHLEPLECP
FDRQPYPEAYVSPSHTKGEQGLYPLPLLNSALDDGKATLTPSNTPLGRNLSTHQTYPVVA
DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPAGASVPPFNAFPHAASVYG
QFTGQALLSGREMVGPTLPGYPPHIPTSVQGSYASSAIAGMVAGSEYSGNAYGHTPYSSY
SEAWRFPNSSLLSSPYYYSSTTRPSAPPTTAAAFDHL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcctggaaaccctggaacgccacggagggctgaaccagctgggaggggccttt
gtgaatggcagacccctgcccgaagtggtgcggcagcgcatcgtggacctggcccaccag
ggcgtgaggccctgcgacatctcccgccagctccgggtcagccatggctgtgtcagcaag
atccttggcaggtactacgagactggcagcatccgacctggagtgatagggggctcgaag
cccaaggtggccacccccaaggtggtggagaagatcggggactacaaacggcagaacccg
accatgtttgcctgggagatccgagaccggctcctggccgagggcgtctgtgacaacgac
actgtgcccagtgtcagctccatcaacagaatcatccggaccaaggtgcagcaaccgttc
aaccttcccatggacggctgcgtggccaccaagtccctgagcccaggacacacgctgatc
cccagctcggccgtgacgcccccagagtctccccagtccgattctctgggttcaacctac
tccatcaccgggctcctgggggtcgcgcagcctggcagcgacagcaagaggaaactggac
gacagtgaccaggacagctgccggctgagccttgactcccagagcagcggcagcgggccc
cgcaagcaccttcgcacggacgccttcagccagcaccaccttgagccgcttgagtgcccc
tttgatcggcagccgtacccagaggcctacgtctccccgagccacaccaaaggcgagcag
ggcctctacccgctgccgttgctcaacagcgccctggacgacgggaaggccaccctgacc
ccttccaatacacccttggggcgcaacctctcgactcatcagacctaccccgtggtggca
gatcctcattcacccttcgccataaagcaggaaacccccgaggtgtccagttctagctcc
accccttcctctttatctagctccgcctttttggatctgcagcaagtcggctccggggtc
ccagcaggtgcctcggtcccgcccttcaatgcctttccccatgctgcctccgtgtacggg
cagttcacgggccaggccctcctctcagggcgagagatggtggggcccacgctgcctgga
tacccaccccacatccccaccagtgtacagggcagctatgcctcttctgccatcgcaggc
atggtggcaggaagcgaatactctggcaacgcctatggccacaccccgtactcctcctac
agcgaggcctggcgcttccccaactccagcttgctgagttccccgtattattacagttcc
acaacaaggccaagcgcgccacctaccactgccgcggcctttgaccatctgtag
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