Globicephala melas (long-finned pilot whale): 115842594
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Entry
115842594 CDS
T11080
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X4
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04020
Calcium signaling pathway
gmf04024
cAMP signaling pathway
gmf04080
Neuroactive ligand-receptor interaction
gmf04082
Neuroactive ligand signaling
gmf04713
Circadian entrainment
gmf04720
Long-term potentiation
gmf04724
Glutamatergic synapse
gmf05010
Alzheimer disease
gmf05014
Amyotrophic lateral sclerosis
gmf05017
Spinocerebellar ataxia
gmf05020
Prion disease
gmf05022
Pathways of neurodegeneration - multiple diseases
gmf05030
Cocaine addiction
gmf05031
Amphetamine addiction
gmf05033
Nicotine addiction
gmf05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115842594 (GRIN2C)
04024 cAMP signaling pathway
115842594 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115842594 (GRIN2C)
04082 Neuroactive ligand signaling
115842594 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
115842594 (GRIN2C)
04720 Long-term potentiation
115842594 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
115842594 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
115842594 (GRIN2C)
05014 Amyotrophic lateral sclerosis
115842594 (GRIN2C)
05017 Spinocerebellar ataxia
115842594 (GRIN2C)
05020 Prion disease
115842594 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
115842594 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
115842594 (GRIN2C)
05031 Amphetamine addiction
115842594 (GRIN2C)
05033 Nicotine addiction
115842594 (GRIN2C)
05034 Alcoholism
115842594 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmf04040
]
115842594 (GRIN2C)
Ion channels [BR:
gmf04040
]
Ligand-gated channels
Glutamate (ionotropic)
115842594 (GRIN2C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
DUF63
Motif
Other DBs
NCBI-GeneID:
115842594
NCBI-ProteinID:
XP_030693444
LinkDB
All DBs
Position
20:complement(27556308..27574062)
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AA seq
1227 aa
AA seq
DB search
MGGALGPVLLLTSLLGAWAGLGPGQGEQAVTVAVVFGSSGPPEAQARIRLTPQSFLDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGTARVHGIVFEDNVDTEAVAQILDFISFQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHTLFLK
SVRAVADANYVGWRLLDVLTLELGPGGTRAHTQRLLRQIDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYRRQHGTLPAPAGECRGHPGPVSPARKAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRHGNHTFSSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALSSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
RKLRHSVPNASRLDFLLAFSRGIYSCFSGVHSLASPARPPSPDLTAGSAQVSVLKMLQAA
RDIVTTAGVSSSLDRATRTIESWGGGRRAPPPPACPSPRPPTPGPTPEPSPTGCGPPGGG
RTALGRRAPQPPGRPPTPGSSLPDVSQVSGRPAWEARWPSLTARGGRHLSASERRALPER
PQSPERCHYSSFPRADRSGCPFLPLFPETPEPEDLPLLGPEQLARREALLRAAWARGSRP
RHASLPSSVTEGFTRPSSEPSRCARPACGRWTQAQSMRLPSYREACQERVWAGATPWPHG
QHACLHAHAHLPLCWGAVCPHLPPCVSHGPWLPGAWGPPGHRGRTLGLSTEYRDTGGLEE
VSRVACGMYGFPRPCTWRRISSLESEV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggccctggggccggtcctgctactcacctcactcctcggtgcctgggcaggg
ctgggcccggggcagggcgagcaggctgtgacggtggccgtggtgtttggcagctcgggg
ccaccggaggcccaggcccgtatccgcctcaccccccagagcttcctggacctgcccctg
gagatccagccactcaccgtgggtgtcaacaacaccaaccccagcagccttctcacccag
atctgcgggctcctgggcactgcccgagtccacggcatcgtctttgaggacaacgtggac
actgaggccgtggcccagatcctcgacttcatctccttccagacccacgtgcctatcctc
agcatcagtgggggctctgctgtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtgatcaccagcctgcacccgggccacacgctcttcctcaag
agcgtgcgcgccgtcgccgacgccaactacgtgggctggcggctgctggacgtgctcacg
ctggagctgggccccggcgggacgcgcgcccacacccagcgcctgctgcgccagatcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctctttgccgaggcg
gcccaggccggcctggtggggcccggtcacgtgtggctggtgcccaacctggcgctaggc
agcaccgacgcgccccccgccgccttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctgcgccagaaagtccgcgacggcgtggccatcctggccctcggcgcc
cacggctaccggcgccagcacggcaccctgcccgccccggctggggagtgccgcggccac
cctgggcctgtcagccctgcccggaaggccttctacaggcacctactgaatgtcacctgg
gagggccgggacttctccttcagtcctggtgggtacctggtccagcccaccatggtggtg
atcgccctcaaccggcaccgcctctgggagatggtggggcgctgggaccatggtgtcctc
cacatgaagtacccggtgtggcctcgctacagtgcttccctgcagcccgtggtggacagc
cggcacctgacggtggccacgctggaagagcgaccctttgtcatcgtggagagccccgac
cctggcacaggcggctgcgtgcccaacactgtgccctgccgccggcatggcaaccacacc
ttcagcagtggtgacacggccccctacaccaagctttgctgtaagggcttctgcatcgac
atcctcaagaagctggccaaggtggtcaagttctcctacgacctgtacctggtgaccaac
ggcaagcatggcaagagggtgcgcggcgtgtggaacggcatgatcggggaggtgtactac
aagcgggcagacatggccattggctccctcaccatcaatgaggagcgctccgagatcgtg
gacttctctgtgcccttcgtggagacgggcatcagtgtgatggtggctcgcagcaacggc
accgtctccccctcggccttcctggagccctacagccctgccgtgtgggtaatgatgttt
gtcatgtgcctcaccgtggtggccataaccgtcttcatgttcgagtacttcagccccgtc
agctacaaccagaacctcaccagcggcaagaagtctgggggcccgtccttcaccatcggc
aagtctgtgtggcttctctgggcactggtcttcaacaactcggtgcccatcgagaacccc
cggggcaccaccagcaagatcatggtcctggtctgggctttcttcgccgtcatcttcctc
gccagctacaccgccaacctggccgccttcatgattcaggagcagtacatcgacactgtg
tctggcctcagtgacaagaagttccagcggcctcaggatcagtacccgcccttccgcttc
ggcaccgtgcccaacggcagcacggagcggaacattcgcagcaactaccgcgacatgcac
acccacatggtcaagttcaaccagcgctcagtggaggacgcgcttagcagcctcaagatg
gggaagctggatgccttcatctatgacgctgctgtcctcaactacatggcgggcaaggac
gagggctgcaagctggtcaccattggctctggcaaggtctttgccaccactggctacggc
atcgccatgcagaaggactcccactggaagcgggccatagacctggcgctcctgcagttc
ctgggggacggggagacccagaagctggagacggtgtggctctcggggatctgccagaac
gagaagaacgaggtgatgagcagcaagctagacatcgataacatggccggcgtcttctac
atgctgctcgtggccatggggctggccctgctggtcttcgcctgggagcatctggtctac
cggaagctgcgccactcggtgcccaacgcgtcccggctggacttcctgctggccttcagc
aggggcatctacagctgctttagcggggtgcacagcctggccagccccgcgcggccgccc
agcccggacctcaccgccggctcggcccaggtcagcgtgctcaagatgctgcaggcggcg
cgcgacatcgtgaccacggcgggcgtgagcagctccctggaccgcgccacgcgcaccatc
gagagctggggcggcggccgccgtgcgcccccgccgcccgcctgccccagtccgcggccg
cccacccccggcccgacccccgagccgagccccacgggctgcgggccgccgggcgggggc
cgcaccgcgctggggcgtagggccccgcagcccccgggccgccccccgacgcccgggtcc
tccctacccgacgtctcccaggtgtccggccggccggcctgggaggcgcggtggccgtcg
ctgaccgcgcgcggcgggcggcacctctcggcctccgagcggcgcgcgctcccggagcgc
cctcagtcgcccgagcgctgtcactacagctccttccctcgagccgaccggtcagggtgc
cccttccttccgctcttcccggagacccccgagcccgaggacctgccgctgctcgggccg
gagcagctggcccggcgggaggctctcctgcgcgcggcctgggcccgaggttcgcgcccg
cgccacgcttccctgcccagctcggtgaccgagggcttcacccggcccagctcggagccc
tcccggtgtgcccgcccggcctgcgggcgctggacgcaggcgcagtcgatgcggctgccg
tcctaccgggaggcctgccaggagcgggtgtgggcaggggccaccccctggccgcatgga
cagcacgcctgcctccacgcccatgcccacctgccgctttgctggggggctgtctgccct
cacctcccaccctgtgtcagccacggcccctggcttcctggggcttgggggcctccgggg
cacaggggcaggactctggggctgagcacagaatacagggacactggggggctggaagag
gtcagtagggtggcctgtgggatgtacggcttcccccgaccgtgcacctggaggcggatc
tccagcttggaatcggaagtgtga
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