Globicephala melas (long-finned pilot whale): 115842757
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Entry
115842757 CDS
T11080
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X3
KO
K17908
autophagy-related protein 18
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04136
Autophagy - other
gmf04140
Autophagy - animal
gmf05010
Alzheimer disease
gmf05014
Amyotrophic lateral sclerosis
gmf05016
Huntington disease
gmf05017
Spinocerebellar ataxia
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115842757 (WIPI1)
04136 Autophagy - other
115842757 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
115842757 (WIPI1)
05014 Amyotrophic lateral sclerosis
115842757 (WIPI1)
05016 Huntington disease
115842757 (WIPI1)
05017 Spinocerebellar ataxia
115842757 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
115842757 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115842757 (WIPI1)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115842757 (WIPI1)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115842757 (WIPI1)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115842757 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_VPS8
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_NWD2_C
DUF5711
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
115842757
NCBI-ProteinID:
XP_030693901
LinkDB
All DBs
Position
20:complement(22902521..22941412)
Genome browser
AA seq
447 aa
AA seq
DB search
MEAGAADGPSGGVEEALSCFSFNQDCTSLAIGTKSGYKLFSLSSVEQLDPVHGSNDIPDV
CIVERLFSSSLVVVVSHAKPRQMNVYHFKKGTEICSYSYSSNVLSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPPNPTGLCALSINHSNSYVAYPGSRTTGEIVLYDGHALKTVC
TIAAHEGALAAIAFNASGSRLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLAF
SMDSQLLCASSNTETVHIFKLEHLANSQPEEPSTWTSYMGKMLMAATNYLPTQVSDMMNQ
DRAFATGRLGFSGHRNICTLSTIQKLPRLLVASSSGHLYIYSLDPQDGGDCVLIKTHSLL
GSGTADENKENDLRASLPQSYAATVARPSPSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGDQKGKTKQSW
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggggccgcggatggcccctcgggcggggtcgaggaggcgctcagctgcttc
tctttcaaccaggactgcacatccctcgcgattggaaccaaatctggttataagctgttt
tctttgagctccgtggagcagctggaccccgtccacggaagcaatgacatccccgacgtc
tgcatcgtggagcgcctcttctccagcagcctggtggtggtggtgagccacgcgaagcct
cgtcagatgaacgtctaccacttcaagaagggcacggagatctgcagctacagctactcc
agcaacgtcttgtccatcaggctgaaccggcagaggctgctcgtttgcctggaggagtcc
atttacattcacaacattaaagacatgaagcttctgaagaccatcctggatattcctcca
aacccgacaggtctgtgtgccctgtccatcaaccattccaattcctacgtggcctatcct
gggagccggacgacaggcgagatcgtgctctacgacggacacgccctgaagacagtctgc
accattgctgcccacgagggggcgctggccgccattgccttcaacgcctcgggctccaga
ctggccagcgcctccgagaaaggcactgtcatccgggtgttctcggttcccgatgggcaa
aagctctatgagtttcggagaggcatgaaaaggtacgtgacgatcagctctctggctttc
agtatggactcgcaactcctctgtgcttcgagcaacacggagaccgtgcacatcttcaag
ctggagcacctcgccaacagccagccagaggagccctcgacctggaccagctacatggga
aagatgctcatggctgcgaccaactacctccccacccaggtgtccgacatgatgaaccag
gacagggcctttgccaccgggcgcctgggcttctctgggcacaggaacatctgcaccctc
tctacgatccagaagctaccgaggctcctggtggcgtcgtccagtggacacctttacatc
tacagcttggaccctcaggacggaggagactgcgtcctaatcaagacccacagcttgctt
ggctcaggaactgccgatgagaataaagaaaacgacctcagagcttccttacctcagtct
tacgcagcaactgtggccagaccaagcccttctgcagcctccacggtgccaggttattct
gaggatggcggggcgctccgaggagaggtcatccccgaacacgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagttcccccctataatcttgtgccgcggcgatcagaag
ggcaaaacgaagcagtcatggtga
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