Globicephala melas (long-finned pilot whale): 115842762
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Entry
115842762 CDS
T11080
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115842762 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115842762 (ABCA5)
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
115842762 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_23
DUF4162
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
115842762
NCBI-ProteinID:
XP_030693912
LinkDB
All DBs
Position
20:complement(23164914..23230973)
Genome browser
AA seq
1642 aa
AA seq
DB search
MATAIREVGVWRQTRTLLLKNYLVKCRTKKSSVQEILFPLFFLFWLVLISMMHPNKIYEE
VPDMELNPMDKSVLSNLVLGFTPVTNITRDIMHKVSTDHLPNVIITEEYTSEKELLASSL
SKPSNFVGVVFKDFMSYELRFFPDMIPVSSVYMDSRAGCSKSCEAVQYWSSGFTVLQASI
DTAIIQLKTNVSFWKKLEPTKAVLMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSCFVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFLVTVALGFVGLLIVLVESFPKSLVWLLS
PFCQCTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITIIMLAFNSIFYVLLAVYLDQV
IPGEFGLRRSSFFFLKPSYWSKSRRNYKELSEGNVSGSISFSETVEPVSSEFIGKEAIRI
SGIQKTYRKKGENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASV
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGVPANNIIQEVQKVLL
DLDMQAIKDNQARKLSGGQKRKLSVGIAVLGDPKVLLLDEPTAGMDPCSRHIVWNLLKYR
KANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRCCAT
DPLSSLVKQHIPAATLLQQSDQQLVYSLPFKDMDKFSGLFAALDTHSDLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQRPPEEEVHSKPFDEMEQSLLILSETKASLVSTMSVW
KQQVFKIAKFHFLTLKRESKSVRSVLLLLLIFFAVQIFMFLVHHSFKNAVVPIKLVPDLY
FLKPGDKAHKYRTSLLLQNSTDSDISDLLRFFTTQNIMVTMFNDSDYVSAAPHSAALNVM
QSEKDYVFTAVFNGTMVYSLPVLMNIISNYYLYHSNVTESIQIWNTPFVQGITDIVFKIE
LYFQAALLGVIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQALVDVPLFTVV
LTLMLGSLFSFHHGLYFYAVKFLSVVFCLIGYVPSVILFTYITSFTFKNIVNTKEFWSFI
YSVTALVCIAVTEITYFMGYTVAVILHYALCIAVPIYPLLGCLICFIKISWKNMQKKEDT
YNPWDRLLVAVISPYLQCVLWIFLLQYYEKKYGGRSLRKDPFFRTLTTKSKSKKFPEPPN
NEDEDEDVRAERVKVKELLSCQRHEEKPAIMVNNLHKEYEDKKDFLPTRKIKKVANKYVS
FCVKKGEILGLLGPNGAGKSTIINIVVGDIEPTSGQVFLRDYSSDPAGDDDSVKCMGYCP
QINPLWPEITLQEHFEIYGAVKGMSASDMKEVIIRITNALDLKEHLQETVKKLPAGIKRK
LCFALSMLGNPPVTLLDEPSTGMDPKAKQHMWRAIRAAFKNKTRAAILATHCMEEVEAVC
DRVAILVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQHIFPNASHQ
ESFSSILAYKIPKEDVQSLSQSFSKLEEAKRTFAIEEYSFSQATLEQVFIELTKEQEEED
KTCGTSNSTLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaattcgggaagttggagtttggagacagaccagaacactcctactgaag
aattacctcgttaaatgcaggactaaaaaaagtagcgttcaggaaattctttttccacta
ttttttttattttggttagtattaataagcatgatgcatccgaataagatctatgaagaa
gtgcctgacatggaacttaaccccatggacaaatctgtcctctctaacctagttcttgga
tttacaccagtgactaatattacaagagacatcatgcacaaggtttctaccgatcacctt
cctaacgtcataattaccgaagaatatacaagtgaaaaagaattgctagcatccagtctt
tctaagcccagcaactttgtaggtgtggttttcaaagacttcatgtcctatgaactccgt
ttttttcctgatatgattccagtgtcttctgtttatatggattcaagagctggctgttca
aaatcatgtgaggctgttcagtactggtcctcagggttcacagttttacaggcctcgata
gatactgccattatacagctgaagaccaatgtttctttttggaagaagctggagccaact
aaggctgtccttatgggagaaactgctgttgtggaaatagatacctttccccgaggagta
attttaatatacctagttatagcattttcacctttcggatactttttggcaattcatatc
gtagcagaaaaagagaagaagttaaaagagtttttaaagataatgggactgcatgacact
gccttttggctctcctgggtccttctgtatacaagtttgatttttctcatgtcccttctc
atggcagtcattgcaacagcttcttctttatttcctcaaagtagctgctttgtgatattt
cttctttttttcctgtatggcttatcatctgtattttttgctttaatgctgacgcctctt
tttaaaaaatcaaaacatgtgggaatagttgaatttttagtcactgtggctcttggattt
gttggccttttgatagtcctcgtggaaagttttcccaaatctttagtgtggcttctaagt
cccttctgtcagtgtacttttttgattggtattgcacaggtcatgcatttagaagatttt
aatgaaggtgctctattttctaatttgactgaagggccgtatcctctgattattactatt
atcatgctggcctttaacagcatattctatgtccttctggctgtctatcttgatcaagtc
attccaggagaatttggtttacggagatcatcgtttttttttttgaagccatcatattgg
tcaaagagcagaagaaattataaggagttatcggagggcaatgttagtgggagtattagt
tttagtgaaactgttgagcctgtttcttcagaatttataggaaaagaagccataagaatc
agtggtattcagaagacatacagaaagaaaggtgaaaatgtggaggctttgagaaattta
tcctttgacatatatgagggtcagattactgcgttacttggccacagtggaacaggaaag
agtacattgatgaatattctttgtggactgtgcccaccttcggatgggtttgcatctgta
tatggacacagagtctcagaaatagatgaaatgtttgaagcaagaaaaatgattggcatt
tgtccacagttagatatacactttgatgtcttgactgtagaagaaaatttatccattttg
gcttcaatcaaaggagtaccagccaataatataatacaagaagtgcagaaggttttactg
gatttagacatgcaggctatcaaagataatcaggccagaaagttaagtggtggccagaaa
agaaaactgtctgtaggaatcgctgttcttggggatccaaaggtactgttgctggatgaa
ccgacagctggaatggacccttgttcgcgtcatattgtttggaatcttcttaaatacaga
aaagctaatcgggtgacagtgtttagtactcatttcatggatgaagctgacattcttgct
gatcggaaagctgtcatatcacaaggaatgttaaaatgtgttggttcttcaatttttctc
aaaagtaaatgggggattggctaccgcctgagcatgtatattgacagatgctgtgccacg
gaccctctctcttctctggttaaacaacatatacctgcagctactttattgcaacagagt
gaccagcagcttgtgtatagcttgcctttcaaggacatggacaaattttcgggtttattt
gctgctctagacactcattcagatttgggtgttatttcttatggtgtttccatgacgact
ttggaagatgtattcttaaagctagaagttgaagcggaaattgaccaagcagattatagt
gtatttactcagcggccaccagaggaagaagtgcattcaaaaccctttgatgaaatggag
cagagcttgcttattctttctgaaaccaaggcttctctggtgagcaccatgagtgtttgg
aaacagcaggtgtttaaaattgcaaagtttcacttccttaccttgaaacgtgagagcaaa
tcagtgagatcagtgttgcttctgcttttaatttttttcgcagttcagatttttatgttt
ctggtgcatcactcttttaaaaatgctgttgttcctatcaaacttgttccagacttatac
ttcctaaagcctggagataaagctcataaatacagaacaagcctgcttcttcaaaattct
accgactcagatatcagtgatcttcttaggtttttcaccacccagaacataatggtgaca
atgtttaatgacagtgactacgtgtctgccgctccgcacagcgcagctttaaatgtgatg
cagtcagaaaaggactatgtttttactgctgttttcaacggtactatggtttattcttta
cctgtattgatgaatatcattagcaactactatctttatcattcaaatgtgaccgaaagc
atccagatctggaataccccattcgttcaaggaattacagacatagtttttaaaatcgag
ctgtattttcaagcagctttacttggggttattgttaccgcgatgccaccttactttgcc
atggagaatgcagagaatcataagatcaaagcttacactcaacttaaactttcgggtctt
ctgccttctgcatactggattggacaggctcttgttgacgtccccttattcactgtggtt
cttactttgatgttaggcagtttattttcatttcatcatggattatatttttatgctgtc
aagttcctttctgtggttttttgccttattggttatgttccatcagttattctgtttacc
tatattacttctttcacttttaaaaacattgtaaataccaaagaattttggtcatttatc
tattctgtgacagcattggtttgcattgcagtcaccgaaataacttattttatgggatat
acagttgcagttattcttcattatgctttgtgcatagccgttccaatctatccgctccta
ggctgcctgatttgtttcataaagatttcttggaagaatatgcaaaagaaagaggacacc
tacaacccatgggatcgtcttttggtggctgttatatcgccttacctgcagtgtgtgctg
tggattttcctcttacagtactacgagaaaaaatatggaggcagatcattaagaaaggat
ccctttttcaggacccttacaacaaagtccaaaagtaagaagtttccagaaccaccaaac
aatgaggatgaagatgaagatgtcagagctgaaagggtgaaggtcaaagaattgctgagc
tgccagcgccacgaggagaagccagccattatggtcaacaatttgcataaagaatatgaa
gacaagaaagattttcttcctacaagaaaaataaagaaagtggcaaataaatatgtctcc
ttctgtgtgaaaaaaggagagatcttgggactattgggtccaaatggtgcaggcaaaagt
acgattattaatattgtggttggtgatatagaaccaacttcaggccaggtatttctaaga
gactattcttcagacccagctggagatgatgattccgtaaagtgtatgggctactgtcct
cagataaacccactgtggccggagattacattacaggaacattttgaaatttatggagct
gtgaaaggaatgagtgccagtgacatgaaagaggtcataattcgaataacaaatgcactt
gatctaaaagaacatctccaggaaacggtaaagaaactccctgcaggaatcaagcgaaag
ctgtgttttgctctgagtatgctggggaaccctcccgttactctgctagacgagccatcc
acaggtatggaccctaaagccaaacagcacatgtggagagcaattagagctgcgtttaag
aacaaaacgcgggcagctatcctggccactcattgcatggaggaggtggaggctgtctgt
gaccgagtggctatcctggtgtctgggcagctaagatgtattgggacagtccaacatcta
aagagtaaatttggaaaaggatactttttggaaatcaaattaaaggactggatagaaaac
ctagaagtagaccgtcttcaaagagaaattcagcatattttcccaaatgcaagccatcag
gaaagtttttcttctattttggcttataaaattcctaaggaagatgttcagtccctttca
caatctttttctaagctggaagaagctaaacgtacttttgccattgaagaatacagcttt
tctcaagcgacattggaacaggtttttatagaactcactaaagaacaagaggaagaagat
aagacttgtggtacttcgaacagcacactttggtgggaaagaacacaggaagacagagta
gtattttga
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