KEGG   Globicephala melas (long-finned pilot whale): 115842847
Entry
115842847         CDS       T11080                                 
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04010  MAPK signaling pathway
gmf04020  Calcium signaling pathway
gmf04721  Synaptic vesicle cycle
gmf04723  Retrograde endocannabinoid signaling
gmf04725  Cholinergic synapse
gmf04726  Serotonergic synapse
gmf04727  GABAergic synapse
gmf04728  Dopaminergic synapse
gmf04930  Type II diabetes mellitus
gmf05016  Huntington disease
gmf05020  Prion disease
gmf05022  Pathways of neurodegeneration - multiple diseases
gmf05032  Morphine addiction
gmf05033  Nicotine addiction
gmf05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115842847 (CACNA1B)
   04020 Calcium signaling pathway
    115842847 (CACNA1B)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    115842847 (CACNA1B)
   04725 Cholinergic synapse
    115842847 (CACNA1B)
   04728 Dopaminergic synapse
    115842847 (CACNA1B)
   04726 Serotonergic synapse
    115842847 (CACNA1B)
   04723 Retrograde endocannabinoid signaling
    115842847 (CACNA1B)
   04721 Synaptic vesicle cycle
    115842847 (CACNA1B)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    115842847 (CACNA1B)
  09164 Neurodegenerative disease
   05016 Huntington disease
    115842847 (CACNA1B)
   05020 Prion disease
    115842847 (CACNA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    115842847 (CACNA1B)
  09165 Substance dependence
   05032 Morphine addiction
    115842847 (CACNA1B)
   05033 Nicotine addiction
    115842847 (CACNA1B)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    115842847 (CACNA1B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:gmf04040]
    115842847 (CACNA1B)
Ion channels [BR:gmf04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   115842847 (CACNA1B)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 115842847
NCBI-ProteinID: XP_060156042
LinkDB
Position
6:complement(447823..640843)
AA seq 2365 aa
MVRFGDELGGRYGGAGGGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCLEAGMKIVALGFVLHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNI
LFAVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFLPLIVIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDAVLKRA
ATKKSRNDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRLV
KAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPR
SYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVSKGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVTSPHQ
NSAKARSVWEQRASQLRLQNLRASCEALYSEMDAEERLRFATSRHLRPDMKTHLDRPLVV
EPGRDGARGPAGGKARPEGAEAAEGADPPRRHHRHRDRDRDKAAAAAPAPAPAGEQDTAD
APKAEGGEPGAREERARPRRSRSKEAAGPREARSERGRGPGPDGGRRHHRRGSPEEAAER
EPRRHRAHRHVPEPGREGAAPGAKGERRARHRGGPRAGPREAESGEEPARRHRTRHKAPS
AHEEAEKEAAAEKEGEVGDRDEDKELRNHQPREPHCDLEASGVMGVGPVHALPSTCLEKV
EEQPEDADNQRNVTRMGSQPSDLSTTVHVPVMLTGLPGETTVVSSGNVDLESQAEGKKEV
EADDVMRNGPRPIVPYSSMFCLSPTNLLRRFCHYIVTMRYFEMSILVVIALSSIALAAED
PVQTDSPRNNVLKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFVVVSGAL
VAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYML
FMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNV
LWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIF
VALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSP
PFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECALKIIAFGVLNYF
RDAWNVFDFVTVLGSITDVLVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFV
QSFKALPYVCLLIAMLFFIYAIVGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSAT
GEAWHEIMLSCLGSRACDALANAAECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEY
LTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYK
RLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLP
QKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQIHQAPGGLSQMGPVSLFHPL
KATLEQTQPAVLRGARVFLRQKSSASLSNGGAVHTQEGGIKESVSWATQRTQEVPCEVTT
PLERGHSAEIPVVQTGKPAVDVQMQSMPLRGPDGEPQPGLESQGRAASMPRLAAETQPAP
DASPMKRSISTLAPQRPPVARLCNAALDRAPASQAAPHHHHRCHRRRERKPRSLEKGPSP
SADTDGAPNSAAGPGPPPGDGPAGCRRERRQERGRSQERRQPSASSEKQRFYSCDRFGGR
EPPQPQPSLSSHPASPTAGQEPGPPRQGSASANGSPLLPTSGASTPGRGGRRQLPQTPLT
PRPSIAYKTANSSPVHFAGAQTSLPAFSPGRLSRGLSEHNALLQRDPLSQPLAASSRIGS
DPYLGRRLDSEAAARTQPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHC
TLGLSSGGAGRGRRSYHHPDQDHWC
NT seq 7098 nt   +upstreamnt  +downstreamnt
atggtccgtttcggggacgagctgggcggccgctatgggggcgccggcggcggggagcgg
gcccggggcggcggggccggcggggcgggcggcccgggccctgggggtctgcagccgggc
cagcgggtcctctacaagcagtcgatcgcccagcgcgcgcggaccatggcgctatacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgttttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccgtttgagtacatg
attctggccaccatcatcgccaactgtatcgtgctggcactggagcagcacctccccgac
ggagacaagacgcccatgtctgagcggctggacgacacggagccgtacttcatcggcatc
ttctgcctcgaggccgggatgaagatcgttgcgctgggcttcgtcctgcacaagggctcc
tacctgcggaatggctggaacgtcatggacttcgtggtggtcctcacggggatcctcgcc
acagctggcactgactttgacctgcgaaccctgcgggctgtgcgtgtgctgaggcccctg
aagctggtgtctgggattccaagtctgcaggtggtgctcaagtccatcatgaaggccatg
gttccgctcctacagatcgggctgcttctcttcttcgccatcctcatgtttgccatcatt
ggcctcgagttctacatgggcaaattccacaaggcctgtttccccaacagtacagacgca
gagccggtgggcgacttcccctgtggcaaggaggccccagcccggctgtgcgagggtgac
actgagtgccgggagtactggccgggacccaacttcggcatcaccaactttgacaacatc
ctgttcgccgtcctgacggtgttccagtgcatcactatggagggctggaccgacatcctc
tacaacaccaacgatgcggctggcaacacctggaactggctctacttcctgcccctcatc
gtcatcggctccttcttcatgctcaacctggtgctgggcgtgctctcgggggagttcgcc
aaggagcgcgagcgggtggagaaccgccgggcctttctgaagctccgccggcagcagcag
atcgagcgggagctcaacgggtacctggagtggatcttcaaggccgaggaagttatgctg
gccgaggaggacaagaacgcagaggagaagtcccctctcgatgcagtgttgaagagagca
gccaccaagaagagccggaacgacctgatccacgcggaggagggggaggaccgttttgca
gacctctgtgctgtggggtccccctttgcccgagccagcctcaagagcgggaagacggag
agctcgtcgtacttccgcaggaaggagaagatgttccggttcttcatccggcgtctggtg
aaggcgcagagcttctactgggtggtgctgtgcgtggtggccctgaacacgctgtgcgtg
gccatggtgcactacaaccagccccagcggctcaccacggcgctgtactttgcagagttt
gttttcctgggtctcttcctcacagagatgtccctgaagatgtacggcctggggcccagg
agctacttccggtcctccttcaactgcttcgattttggggtcatcgtggggagcatcttc
gaagtggtctgggcggccatcaagccaggaacctcctttgggatcagtgtgctgcgggca
ctccggctgctgagaatcttcaaagtcacgaagtactggagctccctgcggaacctggtg
gtgtcgctgctcaactccatgaagtcgatcatcagcctgctcttcctgctcttcctcttc
atcgtggtcttcgccctgctgggcatgcagctcttcgggggacagttcaactttcaggac
gagactccgacgaccaacttcgacaccttccccgccgccatcctcacggtcttccagatc
ctgactggggaggactggaacgcggtgatgtatcatgggatcgaatcgcaaggtggagtc
agcaaaggcatgttctcgtcggtttacttcattgtcctgacgctgtttggaaactacact
ctgctgaacgtcttcctggccatcgccgtggacaaccttgccaacgcgcaggaactgacc
aaggacgaggaggagatggaagaagcagccaaccagaagcttgctctgcaaaaggccaaa
gaagtggctgaagtcagccccatgtctgccgccaacatctccatcgccgcttttgtaaag
caaactcgaggtactgtatctcgcagctcatctgtctccagcgtaacctcaccgcatcag
aactcggccaaggcgcgctcggtgtgggagcagcgggccagccaactgcggctgcagaac
ctacgagccagctgcgaggcgctgtacagcgagatggacgccgaggagcggctgcgcttc
gccacctcccgccacctgcggcccgacatgaagacgcacctggaccggccgctcgtggtg
gagccgggccgggacggcgcgcgggggcccgcggggggcaaggcccggcccgagggcgcg
gaggctgccgagggcgcggacccgccgcgcaggcatcaccggcaccgagacagagacagg
gacaaggccgcggccgcggccccggcgccggcgccggcgggggagcaggacacggcggac
gccccgaaggcggagggcggggagccgggggcccgggaggagcgggcacggccgcgccgc
agccgcagcaaggaggccgcgggcccccgggaggcccggagcgagcgtggccgcggcccg
ggacccgacggcggccggcgccaccaccggcgcggctccccggaggaggcggcagagcgg
gagccccggcgccaccgagcgcaccggcacgtgcccgagccgggcagggagggcgcggcg
cccggggctaagggcgagcggcgagcgcggcaccgcggcggcccccgggccggcccccgg
gaggcggagagcggagaggagccggcgcggaggcaccgcacgcggcacaaggcgccgtcc
gcgcacgaggaggcggagaaggaggccgccgcggagaaggagggcgaggtgggggacagg
gacgaagacaaggagctccgcaaccaccagcctagggagccacactgtgatctggaggcc
agtggggtaatgggtgtgggccctgtgcatgccctgcccagcacctgtctagagaaggtg
gaagaacagcccgaggatgcagataatcagcggaacgttactcgaatgggcagtcaaccc
tcggatctgagcaccactgtgcacgtcccagtgatgctgactggccttcctggggagacc
acggtcgtttccagtggtaacgtggacctggaaagccaagcagaagggaagaaggaggtg
gaagctgatgatgtgatgaggaacggcccccgacccatcgtcccttacagctccatgttc
tgcttaagccccaccaacctgctccgccgcttctgccattacatcgtgaccatgcggtac
ttcgagatgagcatcctcgtggtcattgccctgagcagcatcgccctggccgctgaggac
cctgtgcagacagactcgcccaggaacaacgtgctgaagtacatggactacatcttcaca
ggcgtcttcacctttgagatggtgataaagatgatcgatttgggactgctgctgcaccct
ggtgcgtacttccgggacctctggaatattctggacttcgttgtggtcagtggggccctg
gtggcatttgccttctcaggctccaaagggaaagacatcaacaccatcaagtccctgagg
gtcctgcgtgtgctgcggccgctcaagaccatcaagcggctgcccaagctcaaggctgtg
tttgactgtgtggtgaactccctgaagaacgtcctcaacatcttgattgtctacatgctc
ttcatgttcatatttgccgtcatcgcggtgcagctcttcaaggggaagtttttctactgc
accgacgagtccaaggagctggagcgggactgcaggggccagtacttggattatgagaag
gaggaggtggaggctcagccgcggcagtggaagaaatacgacttccactacgacaacgtg
ctctgggccctgctgaccctgttcacagtgtccacgggggaagggtggcccatggtgctg
aaacactcagtggacgccacctatgaggagcagggcccgagccctgggtaccgcatggag
ctgtccatcttctacgtggtctacttcgtggtcttccccttctttttcgtcaacatcttt
gtggccttgatcatcatcaccttccaggagcagggggacaaggtcatgtctgaatgcagc
ctggagaagaatgagagggcttgcatcgacttcgccatcagcgccaaacccctgacgcgg
tacatgccccagaacaagcagtcgttccagtacaagacgtggacgttcgtggtctcgcca
cccttcgagtatttcatcatggctatgatagccctgaacactgtggtgctgatgatgaag
ttctatgacgcgccctacgagtacgagctgatgttgaagtgtctgaacatcgtgttcacg
tccatgttctccatggagtgcgcgctcaagatcatcgccttcggggtgctgaactatttc
agagacgcctggaacgtctttgacttcgtcaccgtgttgggaagtattactgatgtttta
gtaacagagattgcgaacaacttcatcaacctcagcttcctccgcctcttccgcgccgcc
cgactcatcaagctgctccgccaaggctacaccatccgcatcctgctctggaccttcgtc
cagtccttcaaggcgctgccctacgtgtgcctgctcatcgccatgctgttcttcatctac
gccattgtcggcatgcaggtgtttggaaacatcgccctggatgacgacaccagcatcaac
cggcacaacaactttcggacgtttctacaagccttgatgctgctgttcaggagcgccact
ggggaggcctggcacgagatcatgctgtcctgcctcggcagccgggcctgcgacgcgctc
gccaatgccgctgagtgtgggagcgacttcgcctacttctactttgtctccttcatcttc
ctctgctcctttctgatgttgaacctctttgtggcggtgatcatggacaattttgagtac
cttacgcgggactcttccatcctagggcctcaccacctggacgagttcatccgggtctgg
gctgagtacgacccggctgcgtgtgggcgcatcagttacaatgatatgtttgagatgctg
aaacacatgtccccgcccctggggctggggaagaaatgccctgctcgagttgcatacaag
cgcctcgttcgtatgaacatgcccatctccaacgaggacatgaccgtccacttcacgtcc
acgctgatggccctcatccggaccgcactggagatcaagctggctccagctggcacaaag
cagcatcagtgtgacgcagagctgaggaaggagatttcctctgtgtgggccaatctgccc
cagaagaccctggatttactggtgccgccccataaacccgatgagatgacagtggggaaa
gtgtacgcagctctgatgatattcgacttctacaaacagaacaaaaccaccagagaccag
attcaccaagctcccggaggcctgtcccagatgggccccgtgtccctgttccaccctctg
aaggccacgctggagcagacgcagccggccgtgctccgcggagcccgggttttccttcgg
cagaagagctcggcctccctcagcaatggcggggcagtacatacccaagagggtggcata
aaggagtcggtctcctgggccactcagaggacccaggaggtgccctgcgaggtgacgacg
cccctggagcgtggccactccgcggagatcccggtagtgcagacaggaaaaccggctgtg
gatgtccagatgcagagcatgcccctgagaggccctgacggggagccccaacccgggctg
gagagccagggccgagcggcctccatgccccgcctggcagcagagactcagccggcccca
gacgccagccccatgaagcgctccatctccactctggcgccccagcgcccccccgtggct
cgtctctgcaacgccgccctggaccgcgctccggccagccaggccgccccccaccatcac
caccgctgccatcgccgccgggagaggaagccgaggtccctggagaaggggcccagcccg
tccgcagacacagatggcgcacccaacagcgccgcggggccagggccgcccccgggggac
gggccagcaggctgccggcgggagcgcaggcaggagcggggccggtcccaggagcgaagg
cagccctccgcctcctccgagaagcagcgcttctactcctgcgaccgctttgggggccgt
gagccgccacagccccagccctccctcagcagtcaccccgcgtcgccaaccgctgggcag
gagccaggacccccgagacagggcagtgcttcagcgaacgggagccccctgctgccaaca
tctggtgctagcacccctggccgcggcgggcggaggcagctgccccagaccccgctgacc
ccccgtcccagcatcgcctataagacggccaactcctcgcccgtccactttgctggggct
cagaccagcctccctgccttctcccccggccggcttagccgtggcctttcagaacacaac
gccctgctccagagagaccccctcagccagcccctggccgccagctctcggatcggctcc
gacccgtacctggggcggcgtctggacagcgaggctgctgcccgcacccaacctgaggac
acgctcaccttcgaggaggccgtggccaccaactcgggccgctcgtcccggacttcctac
gtgtcctccctgacctcccagtcgcatcccctccgccgggtgcccaacggctaccactgc
actctggggctcagctctggcggggccggccgggggcggcgcagctaccaccaccccgac
caagaccactggtgctag

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