Globicephala melas (long-finned pilot whale): 115843115
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Entry
115843115 CDS
T11080
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115843115 (AFF3)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115843115 (AFF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
115843115
NCBI-ProteinID:
XP_060165190
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All DBs
Position
12:7147595..7721998
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AA seq
1304 aa
AA seq
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MDSFDLALLQEWDLESLWGEDILNQRSDSLVVEFQSSASRCRRYSIGVYEPDRNVLRRKE
RERRNQETQQDDGAFNSSYSLFSEPYKTNKGDELSNRLQNTLGNYDEMKDFLTDRSNQSH
LVGVPKPGVPQAPVNKIDEHFVADSRAQTQPASVCSTTSSAPAVVPGQQSKRGTVGWQKA
GHPPSDGQQRATQQGSLRTLLGDGVGRQQPRTKQVCNVEVGLQTQDRPPAMGAKHSGSGH
CVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPNESPKLKSSTETSVHCASYRGASAAK
PEPARTKAKLAKFSIPKQGERLRFDTRLEHQDPVSHMAQKKMEENKERKKERKRKESRSG
ETNSCVEEIIREMTWLPPLSAIPAPGKVEPSKFPFPNKDSQLTSSGHSNPKKGDAEPGSP
DNGTSNTSSLGWLSPFTDKGNDALRGMLEDDLKLSSDEEENEQQAAQRTALHALSDSAGL
PQADCRASVPSSKGSSSGSSSSGSSSSSDSESSSGSDSETESSSSESEGSKPPHYSSPEA
EPASSNKWQLDKWLNKVNPHKPPILIHNESHGPESSQYYTPVKDEAPDCGKLPDNVCPTS
LRDKDIKSACKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVTVTAAAPPPTVAGAPAESA
PAPARRSAGKKPTRRTERTSAGDNGHRPEEPAAADALGASAGIPPEPPKPRPCSNSRTSH
RKELRSAVTGEKRRTRGLSRIVPKSKEFIETESSSSSSSADSDLESEQEDYPLSKATAAS
GNDPRLKEAASSISGGGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSD
EVRSLWVKIDLTLLSRIPEHLPQEPGVLSAPAAKDTESAPPSHASDAPAEKTLPKSKRKR
KCDSEDDCREIRKAQGEKESSSRLTASAGSTLSANHCNVNVNSLAIPINKNEKMLRSPTS
PLSDASKHKYPGEDLTSPSRSNSNGLFTSASSSKKHKAENQLQTHGGDLTKAAHSNSENV
LHKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRSADYFMQEAKRMKHKADAMVEKFGKAL
NYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPEDKQLAA
LCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGASGKSTGTPSPMSP
NPSPTSSVGSQGSLSNGNALSPSTIVSIPQRIHQMAANHVSITNSILHSYDYWEMADNLA
KENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSTHLT
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggtgaa
gacatcttaaaccagaggagtgactctctagttgtggaatttcagtcgtcagccagcaga
tgcaggaggtattctattggtgtctatgaaccagatagaaacgtgttacggaggaaagaa
cgagaaagaagaaatcaggaaactcagcaggatgatggcgcgtttaattcaagttactcc
ctctttagtgaaccctacaagacgaacaagggggatgagctctccaaccggctccagaac
actttaggcaattacgatgaaatgaaagactttttaacggatagatcgaatcagagtcat
ctcgttggcgttcccaaacctggggttcctcaggctcccgtgaacaagattgacgagcat
tttgttgcagattcgagagcccagacccagcctgcatccgtctgcagcaccacatcctcc
gccccagcagtggtccctgggcagcagagtaagaggggcaccgtgggctggcagaaggcc
gggcacccaccgtccgatggccaacagagagcaacacaacagggctctctcaggaccttg
ctcggagatggtgttggcagacagcagccgcggaccaaacaggtgtgcaacgtcgaggtg
ggtcttcagacccaggacaggccacctgctatgggagccaagcacagcggcagtggccac
tgtgttcagaactttcctccatccctggcttcaaagcctagcctcgtccagcagaagccg
actgcctacgtgcggccgatggatggccaggaccaggctcccaacgagtctccgaagctg
aagtcgtccacggagaccagcgtgcactgcgcgtcctacaggggagcctcagccgccaag
ccggagcccgccagaaccaaggccaagctcgccaagttcagcatccccaagcaaggagag
aggctcaggtttgacacccggctggagcaccaagaccctgtcagccacatggctcagaag
aaaatggaggaaaataaagaaagaaagaaggaaagaaagagaaaagagagtagatctgga
gaaaccaacagctgtgttgaagaaataattcgggagatgacctggcttccaccactttca
gctattccagcgcctggaaaagtggaaccgagcaaatttccatttccaaataaggactct
cagctcacttcctcgggacacagtaatccaaagaaaggtgatgctgagccagggagtcca
gacaatggcacatcgaatacatcctctctgggatggttatccccatttactgataaggga
aatgatgcactgagaggaatgctagaagatgatcttaagctaagtagcgatgaagaggag
aatgaacagcaggcagcccagagaacggctctccacgctctgtctgacagtgccggcctc
ccgcaggccgactgcagggcctccgtgccctccagcaagggcagcagcagcggcagcagc
agcagcggcagcagttcctccagcgactcggagagcagctcgggatctgactcagagacc
gagagcagctccagcgagagtgagggcagcaaacccccccactactccagccctgaggcc
gaaccagcgtcctctaacaagtggcagctggataaatggctaaacaaagttaatccccac
aagcctcctatcctgatccacaatgaaagccacgggcccgagagcagtcaatactacacc
ccggtgaaggacgaagcgcccgactgcgggaagcttcccgacaacgtctgcccgaccagc
ctgagagacaaggacatcaagagcgcctgcaaggaggagcagaggccgaggaccgcgaac
aaggccccggggagcaaaggggtgaagcagaagtccccgcccgcggccgtggccgtggcc
gtgaccgtgaccgccgccgccccgccgcccacggtggccggtgcgcccgccgagagcgcg
cccgcgcctgcccggaggtccgcgggcaagaaacccacgcggcgcaccgagaggacctcc
gccggcgacaatggccaccggcccgaggagcccgcagccgcggacgcgctgggggcgagc
gcggggatccccccggagccccccaagccccggccctgcagcaacagtaggaccagccac
cgcaaggagctgcgctcggccgtaaccggcgagaagcgccgcacgcgggggctgagccgg
atcgtccccaaatccaaggagttcatcgagaccgagtcgtcctcgtcgtcctcctccgcg
gactcggacctggagtcggagcaagaggactaccctctgtccaaggccactgccgcctcc
gggaacgacccgaggctgaaggaggctgccagcagcatcagcggtggcggcccgcgggcc
cctgtgggctctatcaacgccaggaccaccagcgacatcgccaaggagctggaagagcag
ttctacacactggtccccttcggccgcaatgaacttctctccccgttgaaggacagtgac
gaggtcaggtcactctgggtcaaaattgacctgaccctcctgtccaggatcccagaacac
ctgccccaggagccgggggtcctgagcgctcccgcggccaaggacactgaaagcgccccg
ccgagccacgcatccgatgcgcccgcagaaaagactttgccaaaatccaagaggaaacgc
aagtgtgacagcgaagatgactgccgggagatcaggaaggctcagggagagaaggagagc
tcttcacgactcactgcctccgccggcagtactttgtccgcaaaccattgcaacgtgaac
gtcaacagcttggcaatcccaataaataaaaatgaaaaaatgctccgctcacccacttca
cccctctccgacgcatctaaacacaaataccccggcgaggacctgacgtcccccagcaga
tccaacagcaacggtttgttcacctccgcctcgtccagcaaaaagcataaggctgagaac
cagctgcagacccatggtggagacctcacgaaagcggctcacagcaattccgaaaacgtt
ctccacaagtcacggccacagacagagccatggtctccaggctccaacggccacagggac
tgcaagaggcagaaactcatcttcgatgacatgccacgcagtgcagattattttatgcaa
gaagctaagcgaatgaagcataaagcagatgcaatggtggaaaagtttggaaaggctctg
aactatgctgaagcagccttgtcattcattgagtgtggaaatgcaatggagcagggccca
atggaatccaaatctccttatacaatgtattcagaaacagttgagctcatcagatatgct
atgagactaaaaacccactcaggccccaatgccacaccagaggataaacagctggctgca
ttatgttaccgatgcctggctctcctgtactggcggatgtttcgactcaaaagggaccac
gctgtaaagtattcaaaagcacttatcgactatttcaagaattcatctaaagctgcccaa
gccccatctccatggggggccagtggaaagagcactggcaccccatcccccatgtctccc
aacccctctcccaccagctccgtgggatctcaggggagcctctccaatgggaacgccctg
tccccatcaaccatcgtcagcatcccacagcgtatccaccagatggcagccaaccacgtc
agcatcaccaacagcattctccacagctatgactactgggagatggcggacaacctggcc
aaggagaacagagaattcttcaatgacctggacctgctcatggggccagtcaccctgcac
agcagcatggagcacctggtccagtactcccagcagggcctgcactggctgcggaacagc
acccacctgacatag
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