KEGG   Globicephala melas (long-finned pilot whale): 115843151
Entry
115843151         CDS       T11080                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04140  Autophagy - animal
gmf04148  Efferocytosis
gmf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115843151 (VPS11)
   04148 Efferocytosis
    115843151 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115843151 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmf04131]
    115843151 (VPS11)
Membrane trafficking [BR:gmf04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    115843151 (VPS11)
   Hops complex
    115843151 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin zf-C3HC4_2 zf-RING_2 zf-C3HC4 TPR_Vps41 zf-rbx1 TPR_GEMI5 zf-C3H2C3 zf-RING_UBOX zf-RING_5 DUF1993 zf-RING_11 zf-ANAPC11 zf-C3HC4_3 zf-RING-like zf_RING_Vps8_fungal DLP_helical DUF5847
Other DBs
NCBI-GeneID: 115843151
NCBI-ProteinID: XP_030694775
LinkDB
Position
8:94427189..94436887
AA seq 941 aa
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPASGPSASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGAEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPHVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTELLKGLCTDYRPSLEGRGDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEEEPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVLAVCERHGEQEPSLW
EQALSYFARKEEDCKQYVAAVLKHIEGKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTASLEAGLQRDLLIHARRGT
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggcggcttacctgcagtggcggcgcttcgttttcttcgacaaggagctggtgaaggag
ccactgggcaatgatggggctgctcccggggctgcgcctgcttctggaccctctgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgagggagcctagtc
tttggagacatggaaggccagatatggttcttgccccgctccctacagcttaccgggttc
caggcttacaaactacgggtgacacacctgtaccagttgaagcagcacaacattctggca
tctgttggtgaggatgaagaggggatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcactcgaatcttccctgccatcccaggggcagagccg
actgttgtatcttgtttgactgtccatgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacactgaacaaaggggacatcactcgggaccggcatagcaagacccag
attttgcacaagggcaactatcctgttaccggactggcctttcgccaagcaggaaagacc
actcacttgtttgttgtgacaactgagaatgttcagtcctacatagtttctggaaaggac
taccctcatgtggagttggacacccacggttgtggcctgcgctgctcagccctaagcgac
ccttctcaggacctgcagttcatagtggcaggggatgaatgtgtctacttataccagcct
gatgaacgggggccctgcttcgcctttgagggccataaactcattgctcactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcccagagctccgacaagcagattctcaacatctatgacctgtgcaacaagttc
atagcctatagcaccgtctttgaggatgtagtagatgtgcttgctgagtggggctccctg
tacgtgctgacacgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctattcgagatggcgattaatctggccaagagccag
catctggacagcgatgggttggcccagatcttcatgcagtatggggaccatctctacagc
aagggcaaccatgatggggctgtccagcagtatatccgaaccattggaaagttggagcca
tcgtatgtgatccgcaagttcctggacgcccagcgcatccacaacctgacggcttacctg
cagaccctgcaccggcagtccctggccaatgccgaccacaccaccctactgctcaactgc
tacacaaagctcaaggacagctcgaagctggaggaattcatcaagacaaagagtgagagt
gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactactcc
catgccctctatttggctgagaaccacgcacatcacgagtggtacttgaagatccagcta
gaggacatcaagaattatcaggaggcccttcgatacatcggcaagcttccttttgagcag
gcagagagcaacatgaaacgctacggcaagatcctcatgcaccacataccagagcagacg
accgagttgctaaagggactttgtaccgactatcggcccagccttgaaggccgaggcgat
agggaggctccaggctgcagggccaactcagaggagttcatccccatctttgccaacaac
ccgcgggagctgaaagctttcctagagcacatgagtgaggtgcagcctgactccccgcag
ggcatctatgacacgctccttgagctgcgactccagaactgggctcacgaggaggagccg
caggtcaaagagaagcttcacgcagaggccatctccctactgaagagtggtcgcttctgt
gacgtctttgacaaagccctggtcctctgccagatgcacgacttccaggatggagtcctt
tacctctatgagcaggggaaactgttccagcagatcatgcactatcacatgcagcacgag
cagtaccggcaggtgctcgccgtgtgcgagcgccacggggagcaggagccctccctgtgg
gaacaggcgctcagctacttcgcccgcaaggaggaggactgcaagcagtacgtggcggcc
gtgcttaagcacatcgagggcaagaacctcatgccgcctctcctagtggtgcagaccctg
gcccacaactccacggccaccctgtctgtcatccgggactacctagtccaaaaactgcag
aagcagagccagcagatcgcgcaggatgagctccgggtgcggcgctaccgagaggagacc
acccgtatccgccaggagatccaggagctgaaggcgagtccgaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctcagtccactttctctgcggccac
tccttccaccagcactgctttgagagttactcagaaagtgatgccgactgccccacctgc
ctccctgaaaaccgcaaggtcatggatatgattcgggcccaggaacagaagcgagatctc
catgatcagttccagcaccagctcaagtgctccaacgacagcttctctgtgattgctgac
tactttggccgaggtgttttcaacaaattgactctgctgaccgacccgcccacagcccga
ctgactgcgagcctggaggctgggctgcagagggacttgctcatacacgccaggaggggc
acttaa

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