Globicephala melas (long-finned pilot whale): 115843382
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Entry
115843382 CDS
T11080
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmf03016
]
115843382 (TRUB1)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
115843382 (TRUB1)
Transfer RNA biogenesis [BR:
gmf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115843382 (TRUB1)
Prokaryotic type
115843382 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
115843382
NCBI-ProteinID:
XP_030695180
LinkDB
All DBs
Position
16:complement(15135212..15165642)
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AA seq
348 aa
AA seq
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MAAAEAAVVSSSSLKPDTTPVPESAGMAAATAATSSAMAAAAAVAARTGSEARVSKPALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKLLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPF
FTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQ
SLEQCSSLLPAETALKKSKPEESNEPVLSCEYITLNEIKGEDDVIKTF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcatccttgaaaccagacacaacccca
gtccccgaaagtgcaggaatggctgcagccacggccgccacatcctcagcgatggctgca
gccgcggcggttgcggccaggaccggatccgaagccagggtctccaagcccgcgttggct
actaagctgctgtctctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttca
gccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctcca
gaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactctagacagt
gcagcccgaggagtcctggtggttggaattggaaggggaacaaaactgttgaccagtatg
ttgtcagggtccaagaggtatattgccactggtgaactggggaaagctactgacacgcta
gattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaggaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctcctctctattctgca
ttaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtagtagaagca
aaacctgccaggccagttaccgtgtacagtctttcccttcaaaaattccagccaccattt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcaaagaactgtcttcctgtgccaatgtgctagagctgacccgcaccaaacagggaccc
tttacactggaggagcacgcccttcccgaagacaaatggacaattgacgacattgcacag
tctcttgagcagtgctcatcccttctcccagcagagacggcacttaaaaaatcaaaacct
gaggagtctaatgagccagttttgagctgtgagtacataactctaaatgagataaaggga
gaagatgatgtgattaagacattttaa
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