Globicephala melas (long-finned pilot whale): 115843441
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Entry
115843441 CDS
T11080
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04270
Vascular smooth muscle contraction
gmf04360
Axon guidance
gmf04611
Platelet activation
gmf04625
C-type lectin receptor signaling pathway
gmf04810
Regulation of actin cytoskeleton
gmf05135
Yersinia infection
gmf05152
Tuberculosis
gmf05163
Human cytomegalovirus infection
gmf05200
Pathways in cancer
gmf05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115843441 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
115843441 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
115843441 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
115843441 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
115843441 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115843441 (ARHGEF12)
05205 Proteoglycans in cancer
115843441 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
115843441 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
115843441 (ARHGEF12)
05152 Tuberculosis
115843441 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115843441 (ARHGEF12)
Membrane trafficking [BR:
gmf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115843441 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
115843441
NCBI-ProteinID:
XP_030695298
LinkDB
All DBs
Position
8:95575593..95719989
Genome browser
AA seq
1545 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQFPLADSEVEPSVVGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAAVTSSKPLGDGLAVSEIEADPGDGLGRIDYGSGDAS
RPSSESADSPKSGLKERIYLEENPEKSEVIQDTDTQSLIGSPSTRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKIDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHISTPSSVSPEPQDSAKLRQSGLTSEGVDTGY
LPANSMSSMVSGATLSQEGGKENDMGSKQVGETPASGDSLDGTPRTPSTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRRFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLA
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTGDSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDEEEPPKLKVEHHGISVSGLQSPDRDLGLESPLMSSKPQSHSLDTS
GKSEVDDDLFVAERQFAKEQHADGTLKEVGVNYQITVPDPHLPVSEERWALDALRNLGLL
KQLLVQQLGLTEKSTQEDWPHFPRCRTASLGAQADSGTQKPGNIKAYHPCEGQMPFRTGT
GDISTCYSPWTSTESSAPRDSVVLAFQDSQASNILVMDHMIMTPEMPPAEPEGGLDESGE
HFFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTCLILDGYETVQESSTDEEIASSLPP
QPATGIPSMDSTRRQQRSPQNAHSDGAVSPFTPEFLVQQRWGAMEDSCLEIRSPSSCADS
QSQIMEYIRKIEADLEHLKKVEESYSILCQRLAGSALTDKHSDKS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtgttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggcgtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatctggaagtggtgaagctaatcaaatcgggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagtttccacttgctgattctgaa
gtagagccatcagtcgttggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacagccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcaactgcaagagcagttatccaaagccacaggctctgct
caggatggagctgcagttacgtcctccaagccgttaggcgatgggctagcagtcagtgaa
atagaagcagatcctggtgatggactaggcagaattgactatggcagtggagatgcttct
cggcccagtagtgaaagtgcagatagtcccaagagtggcctgaaagagaggatttatcta
gaggaaaacccagagaaaagtgaagtaattcaggacactgacactcaatcacttattggg
agtccctctacccgtatagcacctcatattattggagcagaggatgatgactttggtact
gaacatgaacagatcaatgggcagtgcagctgtttccagagcattgaactgctaaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataaacagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgatctgcacacctgaaagtttctgtt
cctgatgaaatatcagtagatctagaaaaaagaagacccgagcttattcctgaggatctc
catcgccactatatccaaactatgcaagaaagagtccacccagaagttcaaaggcacttg
gaagattttcgacagaaacgtagcatggggctgacgttggctgaaagcgaactgactaaa
attgatgcagagagagacaaggaccgggtaactttggagaaggaacgggcatgtgcagag
cagattgttgccaaaattgaagaagtgttaatgactgctcaggctgtagaagaagataag
agttcaacaatgcaatatgttattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatagggaaggcgaagaaaaagggaagcgaagaggattccccagcatc
ttgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagccatggaa
ctacagaagcagcgccaccctaagcacatatccacaccctcatctgtgagtcctgaacct
caggactctgctaagttgcgccagagtggattaacaagtgaaggagtagacactggatac
ctgccagccaattccatgtcctccatggtttcaggggccactctttcccaggaaggaggg
aaagagaatgatatgggatcaaagcaagttggagaaacgccagcatctggagactcctta
gatggcacacctcgtactcccagtaccatctttgacttcccacctcctccattagaccaa
gtgcaggaggaggaatgggaagtggaaagggtgactgaacatgggacaccgaagcccttt
cgaaggtttgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcaacagctcgttagtcgagaagtgttattggca
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaaaga
gctcatgttcgaacattgaaggttctagatcaagtgttctatcagcgagtttccagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttagaagatattcttcaa
cttcacattgggttgaatgagcaaatgaaggctgttcgaaagaggaatgagacatctgtt
attgatcagattggggaagatttgctgacttggttcagtggacccggggaggaaaagttg
aaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatccactg
tgtcgtcgtctgcagctgaaagatatcattcccacccaaatgcagaggcttactaagtac
cctcttctattggataatattgccaaatacacagaatggccaacagaaagggagaaggtc
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaggccgttaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgatacctccaatctgaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcacgaagggccattggtttggaaggtgaatagagataaaactattgatctatacact
ttgctgctggaagatattcttgtattgttacaaaagcaggacgatagactggtgttaagg
tgtcatagtaagattctggcatctacaggtgatagcaaacacacatttagccctgtcatc
aagttgaatacagtgctggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgacaatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatctgtcggatggctgcatcagtgaaggagcagtccacaaag
ccaattccactgccacagtcaccaccttgcgaaggagacaatgatgaagaagaacctcca
aaattaaaagtggaacatcatggcatttcagtctctggtctgcagagtccagacagagat
ttgggattagagtctcctttaatgtcgtcaaaacctcaatctcattcactggatacctct
gggaaatcggaggtggatgatgatctctttgtggctgagagacagtttgcaaaggagcag
catgcagatggaaccctaaaggaagttggagtcaattatcaaatcacagtcccagatcca
cacttgcctgtctcagaagaacggtgggcgttggatgcactaaggaatttgggtttgttg
aagcagttgctggtacaacagctgggtttgactgagaagagcactcaggaagactggccg
catttcccgagatgcaggacagcctctctgggggcgcaggcagacagtggaacccagaag
cctggcaatattaaggcctatcatccttgtgaaggacagatgccctttagaactggaact
ggtgacatttcaacttgttacagtccatggacttcaactgaatcttctgctccacgggat
tcagtggtactggcattccaagatagccaggcaagtaacattttagtaatggaccacatg
attatgaccccagagatgcctcccgcagagccagaagggggtcttgatgagagtggagag
cacttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagca
gttaaaaaggaagagaaggatgttaatttgcgcatctcaggaacctgtttgatccttgat
ggctatgaaacagtgcaggagagctccacggatgaggagattgcttcctcgcttcccccg
cagcctgcgacaggcatcccctctatggactctacccgccggcagcagcgttctccccag
aatgctcattctgatggggcagtttcacctttcaccccagaattcctggtccagcagcgc
tggggagctatggaggattcctgtcttgagatccggagtccctcctcttgtgcagattca
caaagccagatcatggagtacattcgtaagatagaggctgacctggaacacttaaagaag
gtggaggaaagttacagcattctttgccaaaggctggctggatcagccctcacagacaag
cactcagataaaagttag
DBGET
integrated database retrieval system
