Globicephala melas (long-finned pilot whale): 115843912
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Entry
115843912 CDS
T11080
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmf03041
]
115843912 (DDX18)
03009 Ribosome biogenesis [BR:
gmf03009
]
115843912 (DDX18)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115843912 (DDX18)
Spliceosome [BR:
gmf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115843912 (DDX18)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
90S particles
Helicases
115843912 (DDX18)
Pre-60S particles
115843912 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
115843912
NCBI-ProteinID:
XP_030696318
LinkDB
All DBs
Position
7:101531888..101548351
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AA seq
721 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASAVNLSETQNGDVSERAVGGGKIKKSLKQS
VNVGLSETQNGDISEEAVVGGKVKKFLKQSMNAGWSEAQNGDLPKETVENVKVKKSSKKN
GDLPKETVENVKVKKSSKKSTTLSNGEAAIQSPNSESKKKKKKKKKRKIVDDAGPDSKKA
KTEDKGDSEDGAQAPEETENSVEKPDNEDDDSMVPSLPLGLTGAFEDTSFDSLTNLVNEN
TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR
NGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINVIVATP
GRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTR
KVEDLARISLKKEPLYVGVDDDKAHATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLM
VFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLCTDVAARGL
DIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLS
EFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQV
ALSFGFKVPPFVDLNVNSNDGKLKKRGGGGGFGYQKARKVEKSKIFKHISKKPSDGRQFS
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttaccgatgaaacttttacgcaagaagatcgagaagcggaacctcaaattg
cgacagcgaaacctaaagctccagggggcctcagctgtgaacttgtcagaaactcaaaat
ggagatgtgtcagaaagagcagtgggaggtggaaaaattaaaaagtccctaaaacagtct
gtgaatgtgggcttgtcagaaacccaaaatggagacatctctgaagaagcagtagtaggt
ggaaaagttaaaaaattcctaaaacagtctatgaatgcaggctggtcagaagcccaaaat
ggagacttacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagaaaaat
ggagacttacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagaaatct
accacgctgtccaatggggaagcagcaatacagtctcccaattcagaatcaaaaaagaag
aagaagaagaagaaaaagagaaaaatagtggatgatgctgggcctgattccaaaaaagca
aaaactgaagacaaaggagactctgaagatggtgcccaggctcctgaagaaacagagaac
agtgtggagaagccagacaatgaggacgatgacagcatggtacccagcctgcccctggga
ctgacaggagcttttgaggatacttcgtttgattctctgactaatcttgtcaatgagaac
actctgaaggcaataaaagaaatgggctttacaaacatgactgaaattcagcataaaagt
atcagaccacttctggaaggcagggatcttctggcagctgcaaaaacaggcagtggcaaa
accctggcatttctcattcctgcagtcgaactcattgttaagttaaggttcatgcccagg
aatggaacaggagtccttattctctcacctactagggaactggccatgcagacttttggt
gtccttaaggaactgatgacacaccatgttcacacgtatgggttaataatgggtggcagt
aacagatctgctgaagcacagaagcttgccaatgggatcaacgtcattgtggccacacca
ggccgtctcctggaccatatgcagaatacaccagggtttatgtataaaaacctacagtgt
ctggttattgatgaagctgatcgtatcttggatgttgggtttgaagaagaattaaagcaa
attattaaacttctgccaacccgcagacagaccatgctcttttctgccacacaaacccgg
aaagttgaagacctggcaaggatttctctgaaaaaggagcccttgtatgttggtgttgat
gacgataaggctcatgcaaccgtggatggtcttgagcagggatatgttgtctgtccttcc
gaaaagagattcctcctactctttacattccttaagaagaaccggaagaagaaactaatg
gtcttcttttcatcctgtaagtccgtgaaataccactatgagttgctgaactacatcgat
ttgcctgtcttggccattcatggaaggcagaaacaaaataagcgtacgaccacattcttc
cagttctgcaatgcagattcggggatcttgttgtgtacagacgtggcagctagagggctg
gatattcctgaagtggactggattgttcagtatgaccctccggatgaccccaaggaatac
attcatcgtgtgggtagaacagccagaggcctgaacggcagagggcatgccttgctcatt
ttgcgccctgaagagttgggtttccttcgctacttgaagcaatccaaggttccattaagt
gaatttgagttttcctggtccaaaatttctgacattcagtctcagcttgaaaaactgatt
gaaaagaactacttccttcataagtcagcccaggaagcgtataagtcatacattcgagcg
tatgattcccattcgctgaaacagatctttaatgttaataacttaaacttgcctcaggtt
gctctgtcatttggtttcaaggtgcctccttttgttgacttgaacgtgaacagcaatgac
ggcaaacttaaaaaaaggggtggcggcggtggcttcggctaccagaaagccagaaaagtc
gagaagtccaagatcttcaagcacataagcaagaaaccatctgacggcaggcagttctct
cactga
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